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Name : clpB (CLI_0484) Accession : YP_001389780.1 Strain : Clostridium botulinum Langeland Genome accession: NC_009699 Putative virulence/resistance : Virulence Product : clpB protein Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 490652 - 493252 bp Length : 2601 bp Strand : + Note : identified by match to protein family HMM PF00004; match to protein family HMM PF02861; match to protein family HMM PF07724; match to protein family HMM PF07728; match to protein family HMM TIGR03346 DNA sequence : ATGGATATTGAAAAATTAACTTTAAAGGTACAGCAAGCTATAAATGATTCTCAACTTGTTGCAGTTAAGTATAATCATCA GCAGATTGATACTATACATTTGTTTTCAGCTCTAATTTCTCAGGATGATGGGTTAATTCCTAATATTTTAGGGAAAATGG GAGTAAATATAAGAGACATTAATGCTGAAACTAATAGGGTTTTAGATAGTATGCCTAAAGTATTAGGCGAGGGAGCTCAG TCATCTTCTGTGTACCCTACTAGAAGATTTGAAGAGGTTCTTGTAAAGGCAGAGAGTATAGCAAAGGATTTTAAAGATTC ATATATAAGTGTAGAACATGTTTTATTAGCAGTAATGGATGTGGATAGAAATACTGTCCTTCCTATACTAGAAAAATTCG GAGTAAAAAAATCAGAGTTTTTAAAGGCATTATCAGCTGTTAGAGGAAGTCAAAGGGTTGATAATCAAGATCCAGAGGGG ACTTATGAAGCTTTAGTGAAATATGGAAGAAACTTAGTAGAAGAAGCTAAAAAGCATAAGCTGGATCCTGTTATAGGAAG AGATGAAGAAATAAGAAGAGTTGTAAGAATTTTATCTAGAAGAACTAAGAATAATCCTGTACTTATTGGAGAACCAGGTG TAGGTAAAACTGCTATTGTAGAAGGATTGGCAGAGAGAATTGTCAGAGGAGATGTACCAGAAAGTTTAAAAAATAAAATA ATATTTTCTCTAGATATGGGAGCACTTATTGCAGGTGCAAAATACAGAGGAGAATTTGAAGAAAGATTAAAAGCAGTATT AAAAGAAGTTCAAAATAGTGAAGGAAGAATAATTTTATTTATAGATGAAATTCATACTATAGTAGGGGCAGGAAAAACAG AGGGTTCTATGGATGCAGGAAATTTAATAAAACCTATGCTTGCCAGAGGAGAACTTCATTGTATTGGAGCTACTACCTTT GATGAATATAGACAGTATATAGAAAAAGACAAAGCTTTAGAAAGAAGATTTCAGCCTGTAATAACAGATGAACCTACAGT AGAGGATACAGTATCTATATTAAGAGGGCTTAAAGAAAGATTTGAAATATACCATGGAATAAGAATACATGATTCAGCTA TTGTAGCTGCAGCTAAGCTCTCTAGTAGATATATTACAGATAGATATCTCCCAGATAAAGCAATAGATTTAATAGATGAA GCTTGTGCTATGATAAGAACAGATATAGATAGTATGCCAACGGAAATGGATTCAATGAAAAGAAAAATATTTCAATTAGA AATAGAAAAGGAAGCATTGTCTAAAGAAAAAGATGTGGCTTCAAAGGAAAGATTAGAAGTCTTAGAAAAGGAATTGAGTG AACTAAAAGAGAAAGATAAAGAAATGACAGCCAAGTATGAAAATGAAAAATCTCATATAACAAAAATAAGAGATTTAAAA GAAAAATTGGATGATGTTAGAGGTCAGATGGAAAAGGCCGAAAGAGAATATGATTTGAATAAAGTTGCAGAATTAAAATA TGGTTTAATACCAGCTCTTCAAAGAGAAATAGAAGAAAAAGAAAAATTAATAAAGGAAAATAGTAATGGAAATGCTATGT TAAAAGAAGAGGTTACAGAGCAAGAAATTTCTGAAATAATCTCTAAATGGACTGGTATACCTGTAACAAGATTAGTTGAA ACTGAAAGACAAAAACTATTACAATTAGGAGATCAATTAGAAACTAGAGTAATAGGTCAAGGAGAGGCAGTAAAAGCAGT AACTAATGCAGTTATAAGAGCTAGAGCAGGACTAAAAGATCCAAGAAAACCTATAGGATCATTTATATTCTTAGGACCTA CAGGTGTAGGAAAGACAGAACTTGCAAAAACTTTGGCCAGAACTTTATTTGATACTGAAGAAAATATTATAAGAATAGAT ATGTCTGAATATATGGAAAAATATTCAGTATCAAGACTTATAGGAGCCCCTCCAGGATATGTAGGATATGAAGAAGGAGG CCAGCTAACAGAAGCCGTTAGGAGAAAACCTTATAGTGTTATATTATTTGATGAAATAGAAAAAGCTCATGACGATGTAT TTAACATATTCCTTCAAATATTAGATGATGGAAGACTTACGGACAATAAAGGGAAGGTTATAGATTTTAAAAATACTATA ATTATAATGACTTCTAATTTAGGAAGTAACTATTTATTAGATAATGAAAGTAAAGAAGGCATAGATGAAAGTGTAAGAAC AAGAGTAAAAGAGGCTTTAAAGGCTAGATTTAAACCAGAATTTTTAAATAGAGTAGATGACATTATAATGTTTAAACCTC TTACGGTAGAAGACATTAAGAGAATAATAGATATATTCTTAGATGATATAAGAAAAAGACTTAAAGATAAGAATATACAG CTTAGAATTACTGATAGTGCAAAAGATATAATGGCCAAAGAAGGTTATGATCCAATATATGGCGCAAGGCCGCTAAAGAG ATATATAGAAGATACTATAGAAACAGAAATAGCAAAACAAATAATAGCAGGTAATATATATGAAGGTACTACTGTAGGAG TAGACTTAAAAGGAGAGTCAATAGTTATAGAAAGAATATAA Protein sequence : MDIEKLTLKVQQAINDSQLVAVKYNHQQIDTIHLFSALISQDDGLIPNILGKMGVNIRDINAETNRVLDSMPKVLGEGAQ SSSVYPTRRFEEVLVKAESIAKDFKDSYISVEHVLLAVMDVDRNTVLPILEKFGVKKSEFLKALSAVRGSQRVDNQDPEG TYEALVKYGRNLVEEAKKHKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAIVEGLAERIVRGDVPESLKNKI IFSLDMGALIAGAKYRGEFEERLKAVLKEVQNSEGRIILFIDEIHTIVGAGKTEGSMDAGNLIKPMLARGELHCIGATTF DEYRQYIEKDKALERRFQPVITDEPTVEDTVSILRGLKERFEIYHGIRIHDSAIVAAAKLSSRYITDRYLPDKAIDLIDE ACAMIRTDIDSMPTEMDSMKRKIFQLEIEKEALSKEKDVASKERLEVLEKELSELKEKDKEMTAKYENEKSHITKIRDLK EKLDDVRGQMEKAEREYDLNKVAELKYGLIPALQREIEEKEKLIKENSNGNAMLKEEVTEQEISEIISKWTGIPVTRLVE TERQKLLQLGDQLETRVIGQGEAVKAVTNAVIRARAGLKDPRKPIGSFIFLGPTGVGKTELAKTLARTLFDTEENIIRID MSEYMEKYSVSRLIGAPPGYVGYEEGGQLTEAVRRKPYSVILFDEIEKAHDDVFNIFLQILDDGRLTDNKGKVIDFKNTI IIMTSNLGSNYLLDNESKEGIDESVRTRVKEALKARFKPEFLNRVDDIIMFKPLTVEDIKRIIDIFLDDIRKRLKDKNIQ LRITDSAKDIMAKEGYDPIYGARPLKRYIEDTIETEIAKQIIAGNIYEGTTVGVDLKGESIVIERI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 7e-159 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_001389780.1 | clpB protein | VFG2084 | Protein | 4e-103 | 41 |
