Gene Information

Name : CLI_3237 (CLI_3237)
Accession : YP_001392449.1
Strain : Clostridium botulinum Langeland
Genome accession: NC_009699
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 3419185 - 3419841 bp
Length : 657 bp
Strand : -
Note : identified by match to protein family HMM PF00005

DNA sequence : 
ATGTTAAGTATAAATAAGCTTTATAGAACATATGGAAGTGGAGAAACAAAGGTAGATGCTATAAAAAACATAAATTTAAC
CATTAATCAGGGAGAATTTGTGGCTATAGTAGGGGCTAGTGGATCGGGAAAGAGCACTCTTCTTCATGCTATGGCTGGCT
TGGACAAGCCTACAGGAGGTAATATAATTATTGATAATCAAGATATATATGATTTAGATGTAGATAGTCTTGCAGCTTTT
AGAAGAAAAAAAATAGGATTTGTTTTTCAGTTTTTTAATTTAATTCCTGTGCTAACATTAGAGGAAAATATACAACTTCC
TATACTATTAGATCATGAAAAAATAGATAAAGATTATCTAAATGAGTTATTAGATATATTAGATTTAAGAGGTAGAAGAG
ATCATCTTCCATCACAGCTCTCTGGAGGGCAACAACAGCGCGCTGCTATAGCAAGGGCATTAATAAACAAGCCTTCAATT
ATATTTGCAGATGAGCCTACAGGAAATCTTGATAAAAAAAATTCAAAAGAGGTAATGGAGTTACTAAAATTATCTTGTAA
AAAGTATAAACAAACATTAGTGATTGTAACTCATGATTTAGAAATAGCTTCCAAAGCAGATAGGATAATTACTATTTCTG
ATGGAGAAGTTAAGTGA

Protein sequence : 
MLSINKLYRTYGSGETKVDAIKNINLTINQGEFVAIVGASGSGKSTLLHAMAGLDKPTGGNIIIDNQDIYDLDVDSLAAF
RRKKIGFVFQFFNLIPVLTLEENIQLPILLDHEKIDKDYLNELLDILDLRGRRDHLPSQLSGGQQQRAAIARALINKPSI
IFADEPTGNLDKKNSKEVMELLKLSCKKYKQTLVIVTHDLEIASKADRIITISDGEVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-31 48
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-32 48
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-32 48
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-32 48

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CLI_3237 YP_001392449.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 1e-48 59
CLI_3237 YP_001392449.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 2e-46 53
CLI_3237 YP_001392449.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 3e-33 46
CLI_3237 YP_001392449.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 1e-28 42
CLI_3237 YP_001392449.1 ABC transporter ATP-binding protein NC_012469.1.7685735. Protein 3e-28 41