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Name : CLI_3168 (CLI_3168) Accession : YP_001392387.1 Strain : Clostridium botulinum Langeland Genome accession: NC_009699 Putative virulence/resistance : Virulence Product : exopolysaccharide biosynthesis protein Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1086 EC number : - Position : 3338156 - 3340021 bp Length : 1866 bp Strand : - Note : identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993 DNA sequence : ATGAGAAAAGATAGGGAATTGATTATTTATGATATATTATTAATAATTTTATCATTATATTTAGCAATTTTATTAAGATT CGATTTTGGTATGGCTTCTATGGCTTCGGAATTTAAAAAATATATGATATTTTTTAAGTTATCAGTAATTCCAGTTATAA TAATAATCTTATTTTTTAATAAAATATTTAATTTATATAGTAGTATATGGAAATATGCTTCAGTAGAAGAACTTATGTCT ATAATTTATTCAGTTTCTATATCTAATATTATATTCATAATTTATAGTTATTTTATTAATTATAAAATTCTAGAAAGCAA TTATTATAGATTCCCATTTACGGTACATATAATATTTTGGATTTTATCCATAGTATCCCTAGGAGGTACAAGATTTATAT ATAGAGTTATAGAAGATAAGGAATGTAATAAGAACAAATGTAACTGTGATTCTAAAGAAAAGAAGTTACTCATAATAGGG GCAGGGGATGCAGCGGCTCTTATTATAAAGGAGATAAAAAGAAATAAGGAACTAAATTATAATATAATAGGTCTTATAGA TGATGATACAGAAAAGCTAGGCAAGAGAATAAATGGTATACCTGTTTTAGGTGGAAGAGAAAGTATCATACGTATGTCTA AAAATAAAAAAATAGATGAAATAATATTAGCTATACCTTCAGCATCATCTGCAACAAGAAGCGAAATAGTGTCTATATGT AAAGAAACTAGTTGTAAATTAAAAACTCTACCAAGTATGGATAAGGTAATACAGGGCAAGTTTAATATAAGTAAGTTAAG AGATGTAAGTATTGAGGATCTTCTTGGAAGAGATGAAGTTAAACTAGATGATAGGGGAATAAATAAATATATAAAGGATA AAGTAGTTTTAGTTACTGGTGGAGGGGGATCTATTGGGTCAGAACTTTGCAGGCAAATAGTTAAATTTTCACCTAAAAAA CTTTTAATATTAGATATATATGAAAACAATGTATATGATGTCCAAATGGAACTAAATTATAAATATCCAGAACTGGACAA AGCTGTTATAATAGCTTCTATAAGGGACGAAAAGAGACTAAGAGATATATTTTCATCATATAAGCCAGATGTAGTTTTTC ATGCAGCAGCACATAAACATGTTCCACTAATGGAAGAGAATCCAGCAGAATCTATTAAAAATAATGTAATAGGAACCTAT AATCTAATAAAATGTGCCCACGAATTTGGAACTGAGCGTTTTGTACAAATAAGTACAGACAAAGCTGTTAATCCAACTAA TATAATGGGAGCTACAAAAAGATTTTGTGAAATAATGATTCAAGCTTTTGATAAAATAAGTAAGACTGAGTTTGTAGCAG TTAGATTTGGGAATGTTTTAGGAAGTAATGGATCTGTTATTCCATTATTTAAAAAACAAATAGCTCATGGAGGTCCTGTT ACTGTAACCCATCCAGAAATAAATAGATATTTTATGACCATACCAGAAGCAGCTCAATTAGTTATACAAGCAGGAGCTAT GGCAAAAGGTGGAGAAATATTTGTTTTGGATATGGGAAAGCCAGTTAAAATTGTAGATTTAGCTAAAGACTTAATAACCT TATCTGGTTATAAGCCAGGGGAGGATATTAAAATTGAGTATACAGGATTAAGGCCTGGGGAAAAATTATATGAAGAATTA TTGATGGATGAAATAGCTTTAACATCAACAGGACATAATAAAATATTTGTAGAAAAACCTATGGAAAATAATATAGACTT TGTAGAAAAATCCATAGAAGAATTTAAGAAAGTTGTTTATAATGATAAAGAAGAAATATTTACATTAATAGAAAAGAAAG TTCCAACATATATAAGAAAAAGATAA Protein sequence : MRKDRELIIYDILLIILSLYLAILLRFDFGMASMASEFKKYMIFFKLSVIPVIIIILFFNKIFNLYSSIWKYASVEELMS IIYSVSISNIIFIIYSYFINYKILESNYYRFPFTVHIIFWILSIVSLGGTRFIYRVIEDKECNKNKCNCDSKEKKLLIIG AGDAAALIIKEIKRNKELNYNIIGLIDDDTEKLGKRINGIPVLGGRESIIRMSKNKKIDEIILAIPSASSATRSEIVSIC KETSCKLKTLPSMDKVIQGKFNISKLRDVSIEDLLGRDEVKLDDRGINKYIKDKVVLVTGGGGSIGSELCRQIVKFSPKK LLILDIYENNVYDVQMELNYKYPELDKAVIIASIRDEKRLRDIFSSYKPDVVFHAAAHKHVPLMEENPAESIKNNVIGTY NLIKCAHEFGTERFVQISTDKAVNPTNIMGATKRFCEIMIQAFDKISKTEFVAVRFGNVLGSNGSVIPLFKKQIAHGGPV TVTHPEINRYFMTIPEAAQLVIQAGAMAKGGEIFVLDMGKPVKIVDLAKDLITLSGYKPGEDIKIEYTGLRPGEKLYEEL LMDEIALTSTGHNKIFVEKPMENNIDFVEKSIEEFKKVVYNDKEEIFTLIEKKVPTYIRKR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 4e-92 | 47 |
| cap1D | AAA64643.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 3e-92 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| CLI_3168 | YP_001392387.1 | exopolysaccharide biosynthesis protein | VFG1300 | Protein | 2e-89 | 44 |
