Gene Information

Name : CLI_3152 (CLI_3152)
Accession : YP_001392371.1
Strain : Clostridium botulinum Langeland
Genome accession: NC_009699
Putative virulence/resistance : Virulence
Product : sugar transferase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG2148
EC number : -
Position : 3318445 - 3319098 bp
Length : 654 bp
Strand : -
Note : identified by match to protein family HMM PF02397

DNA sequence :
ATGGAGTTTAAAATGCCAATTATAGATGTAGAAAAAGATATAAAAAGTAAAAAAGTACAATTTGTTATAAAGAGATTTTC
AGACATAATACTATCCTTAATAGGAATAATTGTACTATCTCCAATATATTTAATTTTATTTTTATGGATAAAATTAGATT
CAAAGGGTCCAGCCTTATTTAAACAAGTTAGAGTTGGAAAAGATAATAAAGATTTTGTAATATACAAGTTTAGAACAATG
ATAGTAGATGCAGAAAAAAAGAAAAAGATAGATTTAGAAATAGAAGATATATCTAACTTTGTTTTCCAAAGCAAAAGTGA
TAATAGAATTACAAAGGCAGGAAAATTTTTGAGAAAAACTAGTTTAGATGAAATACCTCAATTATTTAATGTCTTAAAAG
GAAATATGACTTTAGTAGGTCCAAGACCAGAAATTCCAGATGTAGTTAAACATTATCCCAAGGAGTATAATCAAAGATTA
TTAGTTACACCAGGTATAACAGGATTAGCACAGGTCAGTGGACGTGGAGAAATAGAGCTGGGCAAAACTGTTTATTATGA
TTTAACTTACATAAAGAATTTTTCAGTTTGGTATGATATAAAAATATTATTCCAAACAGCATTTAAAGTTTTTAAAAATG
AAGGTGCTTTTTAA

Protein sequence :
MEFKMPIIDVEKDIKSKKVQFVIKRFSDIILSLIGIIVLSPIYLILFLWIKLDSKGPALFKQVRVGKDNKDFVIYKFRTM
IVDAEKKKKIDLEIEDISNFVFQSKSDNRITKAGKFLRKTSLDEIPQLFNVLKGNMTLVGPRPEIPDVVKHYPKEYNQRL
LVTPGITGLAQVSGRGEIELGKTVYYDLTYIKNFSVWYDIKILFQTAFKVFKNEGAF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1N AAL26667.1 type 8 capsule synthesis gene Virulence SCCcap1 Protein 1e-18 44
SSP0070 YP_300160.1 capsular polysaccharide synthesis protein Not tested SCC15305cap Protein 9e-20 43