|
Name : nagE (CLI_2891) Accession : YP_001392118.1 Strain : Clostridium botulinum Langeland Genome accession: NC_009699 Putative virulence/resistance : Unknown Product : PTS system N-acetylglucosamine-specific transporter subunit IIBC Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG1263 EC number : 2.7.1.69 Position : 3040114 - 3041556 bp Length : 1443 bp Strand : + Note : identified by match to protein family HMM PF00367; match to protein family HMM PF02378; match to protein family HMM TIGR00826; match to protein family HMM TIGR01998 DNA sequence : ATGGCAAAAAACAGTAAATTTTTATCAAAAATTCAAAGGCTAGGCAAATCCCTCATGACTCCTATTGCTGTATTACCAGC AGCTGCTTTGCTACTTAGGTTAGGTCAGCCCGATATCTGGAGTTGGACTGGTTCTTTACCAAGTGGTATTCCTTGGATGT CTTCAGCCGGTTCCGCAATTTTTGATAACTTATCCCTTATTTTTGCTATAGGTATAGCTGTAGGATTGGCAGAGGAAAAT AATGGGGTGGCTGCAATTTCCGCTACTGTTGGTTACCTTGTGCTAACAAATGTTTCTTTAAAATTTGATAATACAATTAA TATGGGAGTTTTATCAGGTATAATTGTAGGTATATTATCTGCATCACTTTACAATAAGTATAAAAATATTAAACTTCCAG ATTATCTAGGTTTCTTTGGAGGAAAACGTTTTGTTCCAATCATAACTTCTTTATACTCTTTAATTTTAGGTATTATATCA GGATTTGTATGGCCTCCAATCCAAAATGTTATAAATAATTTTGGTAACGCAGTTGCAGGGGCCGGTGCCGTCGGAGCATT TTTCTTTGGATTATTTAATAGATTGTTGATTCCAACCGGATTACACCATATTATGAACACAATATTCTGGTTCCAATTCG GCACATTTAAAAATTCATCAGGTAAAATTGCTAATGGTGATTTAAATAGATTTTTCGCTGGTGATCCTACTGCAGGCACT TATATGACTGGCTTCTTTGTAATAATGATGTTTGCTCTTCCAGCAGCCTGTTTTGCTATGGTCAAAGCTGCTAGAGAAGA AAATAAAAAAGCAGTTTCAGGTATGCTTTTAGGTTTAGCATTTACTGCATTCCTTACAGGAGTTACTGAACCAATAGAAT TTACATTTATGTTTATTTCTCCTGTTCTTTATGCAATACATGCTTTGTTAACTGGTATAGCCCTAGCCCTTACATCAGCC TTAGGAATAAAATGTGGATTTGGATTTTCTGCAAGTCTTATAGATTATGGTCTTAATTTTGGTATATCAACTAAACCACT ATTTATAATTCCCATAGGTTTGATATTTGCAGCAATATACTATTTTTTATTCTTATTCTTTATAAAAAAATTCAATTTAC CTACACCAGGGAGGGAATTAGATTCAGAAGTTAATACAAATATCAATGTTGATACGCCTAAAAAAAGTGGACATTCTAAA TTAGAAGATAAAGCTAAAGAAATACTAAACGCTATCGGTAATTCTGAAAATATTGATTCTATAGATGCTTGTGTAACTAG AATAAGACTTGTTGTTTTTGATGGAAGCAAAATAAATGAAGCTAAACTTAAAGAATTAGGCGCTAATGGAATTATGAAGC TTGATGATAAAAATTTCCAAATAGTGGTTGGTACTATAGCTGATCCTTTAGTATCTCAAATGAAACTATTAATGAAAAAA TAA Protein sequence : MAKNSKFLSKIQRLGKSLMTPIAVLPAAALLLRLGQPDIWSWTGSLPSGIPWMSSAGSAIFDNLSLIFAIGIAVGLAEEN NGVAAISATVGYLVLTNVSLKFDNTINMGVLSGIIVGILSASLYNKYKNIKLPDYLGFFGGKRFVPIITSLYSLILGIIS GFVWPPIQNVINNFGNAVAGAGAVGAFFFGLFNRLLIPTGLHHIMNTIFWFQFGTFKNSSGKIANGDLNRFFAGDPTAGT YMTGFFVIMMFALPAACFAMVKAAREENKKAVSGMLLGLAFTAFLTGVTEPIEFTFMFISPVLYAIHALLTGIALALTSA LGIKCGFGFSASLIDYGLNFGISTKPLFIIPIGLIFAAIYYFLFLFFIKKFNLPTPGRELDSEVNTNINVDTPKKSGHSK LEDKAKEILNAIGNSENIDSIDACVTRIRLVVFDGSKINEAKLKELGANGIMKLDDKNFQIVVGTIADPLVSQMKLLMKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ef0067 | AAM75272.1 | EF0067 | Not tested | Not named | Protein | 8e-56 | 41 |
