Gene Information

Name : nagE (CLI_2891)
Accession : YP_001392118.1
Strain : Clostridium botulinum Langeland
Genome accession: NC_009699
Putative virulence/resistance : Unknown
Product : PTS system N-acetylglucosamine-specific transporter subunit IIBC
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG1263
EC number : 2.7.1.69
Position : 3040114 - 3041556 bp
Length : 1443 bp
Strand : +
Note : identified by match to protein family HMM PF00367; match to protein family HMM PF02378; match to protein family HMM TIGR00826; match to protein family HMM TIGR01998

DNA sequence :
ATGGCAAAAAACAGTAAATTTTTATCAAAAATTCAAAGGCTAGGCAAATCCCTCATGACTCCTATTGCTGTATTACCAGC
AGCTGCTTTGCTACTTAGGTTAGGTCAGCCCGATATCTGGAGTTGGACTGGTTCTTTACCAAGTGGTATTCCTTGGATGT
CTTCAGCCGGTTCCGCAATTTTTGATAACTTATCCCTTATTTTTGCTATAGGTATAGCTGTAGGATTGGCAGAGGAAAAT
AATGGGGTGGCTGCAATTTCCGCTACTGTTGGTTACCTTGTGCTAACAAATGTTTCTTTAAAATTTGATAATACAATTAA
TATGGGAGTTTTATCAGGTATAATTGTAGGTATATTATCTGCATCACTTTACAATAAGTATAAAAATATTAAACTTCCAG
ATTATCTAGGTTTCTTTGGAGGAAAACGTTTTGTTCCAATCATAACTTCTTTATACTCTTTAATTTTAGGTATTATATCA
GGATTTGTATGGCCTCCAATCCAAAATGTTATAAATAATTTTGGTAACGCAGTTGCAGGGGCCGGTGCCGTCGGAGCATT
TTTCTTTGGATTATTTAATAGATTGTTGATTCCAACCGGATTACACCATATTATGAACACAATATTCTGGTTCCAATTCG
GCACATTTAAAAATTCATCAGGTAAAATTGCTAATGGTGATTTAAATAGATTTTTCGCTGGTGATCCTACTGCAGGCACT
TATATGACTGGCTTCTTTGTAATAATGATGTTTGCTCTTCCAGCAGCCTGTTTTGCTATGGTCAAAGCTGCTAGAGAAGA
AAATAAAAAAGCAGTTTCAGGTATGCTTTTAGGTTTAGCATTTACTGCATTCCTTACAGGAGTTACTGAACCAATAGAAT
TTACATTTATGTTTATTTCTCCTGTTCTTTATGCAATACATGCTTTGTTAACTGGTATAGCCCTAGCCCTTACATCAGCC
TTAGGAATAAAATGTGGATTTGGATTTTCTGCAAGTCTTATAGATTATGGTCTTAATTTTGGTATATCAACTAAACCACT
ATTTATAATTCCCATAGGTTTGATATTTGCAGCAATATACTATTTTTTATTCTTATTCTTTATAAAAAAATTCAATTTAC
CTACACCAGGGAGGGAATTAGATTCAGAAGTTAATACAAATATCAATGTTGATACGCCTAAAAAAAGTGGACATTCTAAA
TTAGAAGATAAAGCTAAAGAAATACTAAACGCTATCGGTAATTCTGAAAATATTGATTCTATAGATGCTTGTGTAACTAG
AATAAGACTTGTTGTTTTTGATGGAAGCAAAATAAATGAAGCTAAACTTAAAGAATTAGGCGCTAATGGAATTATGAAGC
TTGATGATAAAAATTTCCAAATAGTGGTTGGTACTATAGCTGATCCTTTAGTATCTCAAATGAAACTATTAATGAAAAAA
TAA

Protein sequence :
MAKNSKFLSKIQRLGKSLMTPIAVLPAAALLLRLGQPDIWSWTGSLPSGIPWMSSAGSAIFDNLSLIFAIGIAVGLAEEN
NGVAAISATVGYLVLTNVSLKFDNTINMGVLSGIIVGILSASLYNKYKNIKLPDYLGFFGGKRFVPIITSLYSLILGIIS
GFVWPPIQNVINNFGNAVAGAGAVGAFFFGLFNRLLIPTGLHHIMNTIFWFQFGTFKNSSGKIANGDLNRFFAGDPTAGT
YMTGFFVIMMFALPAACFAMVKAAREENKKAVSGMLLGLAFTAFLTGVTEPIEFTFMFISPVLYAIHALLTGIALALTSA
LGIKCGFGFSASLIDYGLNFGISTKPLFIIPIGLIFAAIYYFLFLFFIKKFNLPTPGRELDSEVNTNINVDTPKKSGHSK
LEDKAKEILNAIGNSENIDSIDACVTRIRLVVFDGSKINEAKLKELGANGIMKLDDKNFQIVVGTIADPLVSQMKLLMKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ef0067 AAM75272.1 EF0067 Not tested Not named Protein 8e-56 41