Gene Information

Name : CLI_2850 (CLI_2850)
Accession : YP_001392078.1
Strain : Clostridium botulinum Langeland
Genome accession: NC_009699
Putative virulence/resistance : Unknown
Product : pyridoxal biosynthesis lyase PdxS
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0214
EC number : -
Position : 2987413 - 2988285 bp
Length : 873 bp
Strand : -
Note : with PdxT forms pyridoxal 5'-phosphate from glutamine, either ribose 5-phosphate or ribulose 5-phosphate, and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate

DNA sequence :
ATGGAAAAGAAATACGAATTAAACAAAAATTTAGCTCAAATGATTAAGAATGGAGTCATAATGGATGTTGTGAATCCAGA
GCAAGCAAAAATTGCAGAAGAAGCTGGGGCTATAGCTGTTATGGCATTAGAAAGGGTTCCATCAGACATTAGAAAACAAG
GGGGAGTAGCTAGAACTTCTGATCCTAAGATGATAAAAGAAATAATAAATGCAGTTTCAATACCGGTTATGGCAAAGGTT
AGAATAGGTCATTTTGTAGAAGCTCAAATATTAGAAGCTATAGGAGTAGATTGTATAGATGAGAGTGAAGTTTTAACGCC
AGCAGATGATTTGTTCCATATAAATAAAAAAGATTTTAAGGTTCCTTTCGTTTGTGGTGCAAGAAATTTGGGAGAGGCTT
TAAGAAGAATAGGAGAAGGAGCTTCTATGATAAGAACTAAAGGGGAAGCAGGTACAGGAAATGTAGTAGAAGCGGTAAGA
CATATGAGAACCATAAGCTCAGAAATGAGAAAACTGCAACTTACACCAAAAGAAGAGTTAATGACTGTAGCTAAAGAAAT
GGGAGCACCATTTAACTTAATAGAATATGTGGCAGAAAAGGGTAAGCTTCCAGTAATAAATTTTGCAGCGGGTGGCATAG
CAACACCAGCAGATGCAGCTTTAATGATGCAGTTAGGGTGTGATGGAATATTTGTAGGCTCTGGAATATTTAAATCAGAT
AGTCCAGAAAAAAGAGCAAAAGCTATAGTTAAGGCAACAACTTATTTTAAGGATCCAGATGTTTTAGCTAAGGTTTCAGA
GAACTTAGGAGGAGCAATGTCAGGTTTAGAAATTAGTAAGCTAGAAACAGAATTTGCTGAAAGAGGCTGGTAA

Protein sequence :
MEKKYELNKNLAQMIKNGVIMDVVNPEQAKIAEEAGAIAVMALERVPSDIRKQGGVARTSDPKMIKEIINAVSIPVMAKV
RIGHFVEAQILEAIGVDCIDESEVLTPADDLFHINKKDFKVPFVCGARNLGEALRRIGEGASMIRTKGEAGTGNVVEAVR
HMRTISSEMRKLQLTPKEELMTVAKEMGAPFNLIEYVAEKGKLPVINFAAGGIATPADAALMMQLGCDGIFVGSGIFKSD
SPEKRAKAIVKATTYFKDPDVLAKVSENLGGAMSGLEISKLETEFAERGW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 3e-80 66
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 5e-80 66
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 4e-80 65