|
Name : recG (CLI_2556) Accession : YP_001391791.1 Strain : Clostridium botulinum Langeland Genome accession: NC_009699 Putative virulence/resistance : Unknown Product : ATP-dependent DNA helicase RecG Function : - COG functional category : L : Replication, recombination and repair COG ID : COG1200 EC number : 3.6.1.- Position : 2679361 - 2681400 bp Length : 2040 bp Strand : - Note : catalyzes branch migration in Holliday junction intermediates DNA sequence : ATGAATGTATATAGTCCTATAACTACTTTAAAAGGAGTGGGACCTAAAACTAAAGAACAATTAGAAAAATGTATGATATT TAACATAATGGACTTACTTTTATATTTTCCAAGGGATTATGAATTTATAGATAATTATAGCAAAGACAAACTGCTAAGTA AAAAAGTAATAATTAAAGTACAAGTAGAAAATATAAAAAGGGATATAAGAACAAGAACAGGTAAAGTTTTAACCACAATT ATATTCAATGATGGAGAGAAAGCTATAGTTGGTAGTTGGTTTAATCAGCCCTATATTAAAAATTATTTTAAAATAGGTGA AGAATATGTACTTCAGGGAAGCTTAAAAGAATATAGGGGGAATTTAACTATAAATAACGCCCAAATATTAAAGAACAAAT GTACAGAAGAGGTAGAGGAAAGAAAAATTATTCCTAAATATCCTTTAAAGGGAGACTTGAAAAATAATTTGCTAATAAAA CTTGTAGATAGTGTTTTGACAAACATTGATATAGGTGAGAATTTACCTATATGGCTTATAGAAAAATATAAGTTTCTATC TTTAGATAAATCCATAAGAACTATACATAAACCAGAAAATCAGAAAGAATTAGAAGAGTCTATAAGAAGATTAAAATTTC AAGAATTATTAGCATATTGCTTAAAAATAGCTTTTTTAAAGGAATACTTAGAAACAGCTACAGAGGGTATATCTTTTATA GTTTCAGAAGAAATAAATAATCTTATAGAAGTATTACCTTTCAAACTGACTAATGCACAAAATAAAGTTTTACAGGAAAT ATTCAAGGACCAAGAAAAAGAAAAACCAATGAATAGGCTTTTACAGGGGGATGTAGGTAGTGGAAAAACTATTATAGCTT TAATATCCCTTTTTAATGTAATAAAAAATGGATATCAAGGAGTAATGTTAGCACCTACAGAAATATTAGCGGTGCAACAT TATGAAGAAGCGTTGAAATTATTTAAGGATTTTAATTTAAATATAGAGCTTTTAATAGGAAGCATAAAGGTATCTTCTAA AAAGGAGATAAAAGAAAAGCTTAAAGAAGGGAAAATAGACTTAATAATAGGTACTCATGCTTTAATTGAAGATGATGTGG AATTTTATAATCTAGGCATGGTTATAACAGATGAACAACACCGTTTTGGAGTTATGCAAAGAAGTAAAATGTTAAATAAA GGAAAAAGCGTAGATACTTTAGTCATGAGTGCAACTCCTATACCAAGAAGCCTTACTTTGAGTCTATATGGAGATTTAGA TTTATCTATTATAGATGAACTGCCACCAGGAAGACAAAAGATAGATACCTACTATGTAAATGATAGCTATAGAAAAAGGG TGTATAATTTTGCACTAAAAGAAATAAATAATGGTAGACAGGTATATATAGTTTGCCCTCTAGTAGAAGAAAAAGAGGAA TTGAATTTAAATTCCGTAGAAAAATTATATGATGATTTGAAAGGGGAATATTTTAAAGAAGTAGAAATTGCTATTTTACA TGGCAAAATGAAAGGAAAAGAAAAAGATACTATTATGAAAGATTTTAAGGAGGGGAAAATAAAAGCCTTAATATCCACTA CTGTTATAGAAGTAGGGGTAAATGTACCTAATGCTACTTTAATGGTTATAGAAAATGCAGAGAGATTTGGTTTAGCTCAA CTTCATCAATTAAGGGGAAGAGTAGGTAGGGGAAAACATAAATCCTATTGTATATTAATTGCTAGAGTGAAAAATGATAT TATAAGAAAAAGAATGGAAATAATGAAAAGTAGTAATGATGGTTTTCTTGTAGCGGAGGAAGATCTAAAGTTAAGAGGTG GAGGTGAAATATTTGGATTTAAACAGCATGGTTCTAGTAATTTGCTTCTGGCTGATGTAATAGAGGATATACATTTACTT AGAATAGCTAATATGGAAAGTAAAAAAATAATAGATAGTAATAATGAAGAGGATAATAAAATAAAAGAAGAAGTAAAAAT TAAGATAAAAAATAATTCAAAGTTTATATGTTTTAATTAG Protein sequence : MNVYSPITTLKGVGPKTKEQLEKCMIFNIMDLLLYFPRDYEFIDNYSKDKLLSKKVIIKVQVENIKRDIRTRTGKVLTTI IFNDGEKAIVGSWFNQPYIKNYFKIGEEYVLQGSLKEYRGNLTINNAQILKNKCTEEVEERKIIPKYPLKGDLKNNLLIK LVDSVLTNIDIGENLPIWLIEKYKFLSLDKSIRTIHKPENQKELEESIRRLKFQELLAYCLKIAFLKEYLETATEGISFI VSEEINNLIEVLPFKLTNAQNKVLQEIFKDQEKEKPMNRLLQGDVGSGKTIIALISLFNVIKNGYQGVMLAPTEILAVQH YEEALKLFKDFNLNIELLIGSIKVSSKKEIKEKLKEGKIDLIIGTHALIEDDVEFYNLGMVITDEQHRFGVMQRSKMLNK GKSVDTLVMSATPIPRSLTLSLYGDLDLSIIDELPPGRQKIDTYYVNDSYRKRVYNFALKEINNGRQVYIVCPLVEEKEE LNLNSVEKLYDDLKGEYFKEVEIAILHGKMKGKEKDTIMKDFKEGKIKALISTTVIEVGVNVPNATLMVIENAERFGLAQ LHQLRGRVGRGKHKSYCILIARVKNDIIRKRMEIMKSSNDGFLVAEEDLKLRGGGEIFGFKQHGSSNLLLADVIEDIHLL RIANMESKKIIDSNNEEDNKIKEEVKIKIKNNSKFICFN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| recG | CAJ77039.1 | ATP-dependent DNA helicase | Not tested | AbaR1 | Protein | 3e-85 | 41 |
