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Name : polA-1 (CLI_2434) Accession : YP_001391676.1 Strain : Clostridium botulinum Langeland Genome accession: NC_009699 Putative virulence/resistance : Unknown Product : DNA-directed DNA polymerase I Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0749 EC number : 2.7.7.7 Position : 2561611 - 2563587 bp Length : 1977 bp Strand : - Note : identified by similarity to SP:P06225; match to protein family HMM PF00476 DNA sequence : ATGGTGATATTTATTGATACTTTATCTATAGATGTTGAAACATATAGCAGTATGGATATAAAGACTTCAGGTGCTTATAA ATATTGTGAATCTCCTGATTTTGAAATATTACTATTTGCTTATGCTTTTAATGATGAACCAGTACAAATAGTAGATTTAG CAAATGGAGAAAAATTACCTTCAAATGTATTTTATGCCTTAACAGATCCAAACATTATAAAAACTGCATTTAATGCTAAC TTTGAAAGAAATTCAATAAAGAATCAATACCCAGCTTTATGCCCACCAGAACAATGGGAATGTACCATGGTAAAAGCTTT GACACTAGGGCTACCAAGTTCCTTGGATATGGTTGGTAAGGCTTTAAAGTTTGAAGAGGATAAGCAAAAGATGAAAGAAG GTAAGGCTTTAATACAATATTTTTGTAAGCCTTGTAAACCTACTAAAACCAATGGTAAGAGAACTAGGAATCTTCCAGAA CATGATATGGAGAAATGGGAAACTTTTAAAGAATACTGTAAGCGAGATGTTGAAGTAGAAAGAGAAATAAGAAATTTATT AAATAGATATGAAACTAAAGTAGAAGAACAAAAATTATGGCAGCTGGACCAACACATAAATGATAGAGGTATTGGTACTG ATTTAATACTTATAAAGCAGGCTATTGAATGTGATACAAACTATACTGAAAGATTAACAAAGGCTGCTATTGAACTTACA GGGCTTGAAAATCCAAACAGTCCTACACAAATAAAAAAATGGATTGGCGAAAGGCTTGGAAGAGAGGTAAAGTCATTAAC TAAAACAAGTATTCCAGGACTTATTGAAGAAGCTACGTCTTTAAATAAAAGTGAAGTTATAAAAATGTTAGAACTAAGGC AACTAATGGCCAAAACTTCTATTAAGAAATATGACACAATGCAAAATGCAAGATGTAAAGATGGTAGAGTAAGAGGTTTA TTACAATTCTATGGAGCTAATAGAACGGGGAGATGGGCAGGAAGATTAGTACAAGTTCAAAATCTACCTCAAAATCATTT ACCGGATCTAGACAACGCTAGGAATTTTGTTAGAGAGGGAAAATTTCAGGAAGTAGAATTTTTATTTGATAGTGTTCCAG ATACATTAAGCCAATTAATAAGAACAGCTTTTATACCTAGAGAAGGTAATAGATTTATAGTATCAGATTTTAGTGCTATA GAAGCTAGGGTTATCGCTTGGTTTGCTGGAGAGCAATGGAGATTAGATGTTTTTAGTACACATGGGAAAATATATGAAGC TTCAGCTAGTCAAATGTTTAAGGTAGCTATAGAAAGTATAAAAAAGGGTTCAGAGTTAAGGCAAAAAGGAAAAATAGCAG AATTGGCACTTGGGTATGGTGGAAGTGTTGGAGCTCTTAGTTCAATGGATAGAAAAAAAAGTATTCCAGAAGAAGAACTT CCTGGACTAGTTAAAAGTTGGAGAAATGCTAATCCTAATATAACTAAATTTTGGTGGGATGTAGATAAGGCTGCTAAGAA AGTTATAAGAGAAAGAACTACGGTGAACTTACAATACGGACTTAAATTTATATATGATCCAGGAGTTTTATTTATACAAT TGCCTAGTGGAAGAAAGCTAAGTTATATAAGGCCAAAGATAGAACCGCATGAAACCTTTAGTGGGGATAAAATCACCTAT GAAGGTATGGAACAAACGTCTAAACAATGGAAAAGAATAGATACTTATGGCCCTAAACTAGTGGAGAATATAGTACAAGC TACATCTAGAGATTGTTTAAGAGAAGCTATGTTTAGAGTAGATAAAGCAGGATATGACATAGTAATGCATGTGCATGATG AAGTTGTATTGGATATACCAAAAGATAGGGCTACAGTTAAAGAAATAAATGAATTAATGGGCCAGCCTATAGAATGGGCT CCGGGATTACCTTTGAAAGCTGATGGATATGAATGCAATTATTACCAAAAGGATTAG Protein sequence : MVIFIDTLSIDVETYSSMDIKTSGAYKYCESPDFEILLFAYAFNDEPVQIVDLANGEKLPSNVFYALTDPNIIKTAFNAN FERNSIKNQYPALCPPEQWECTMVKALTLGLPSSLDMVGKALKFEEDKQKMKEGKALIQYFCKPCKPTKTNGKRTRNLPE HDMEKWETFKEYCKRDVEVEREIRNLLNRYETKVEEQKLWQLDQHINDRGIGTDLILIKQAIECDTNYTERLTKAAIELT GLENPNSPTQIKKWIGERLGREVKSLTKTSIPGLIEEATSLNKSEVIKMLELRQLMAKTSIKKYDTMQNARCKDGRVRGL LQFYGANRTGRWAGRLVQVQNLPQNHLPDLDNARNFVREGKFQEVEFLFDSVPDTLSQLIRTAFIPREGNRFIVSDFSAI EARVIAWFAGEQWRLDVFSTHGKIYEASASQMFKVAIESIKKGSELRQKGKIAELALGYGGSVGALSSMDRKKSIPEEEL PGLVKSWRNANPNITKFWWDVDKAAKKVIRERTTVNLQYGLKFIYDPGVLFIQLPSGRKLSYIRPKIEPHETFSGDKITY EGMEQTSKQWKRIDTYGPKLVENIVQATSRDCLREAMFRVDKAGYDIVMHVHDEVVLDIPKDRATVKEINELMGQPIEWA PGLPLKADGYECNYYQKD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SEQ_2073 | YP_002747288.1 | phage DNA polymerase | Not tested | ¥ÕSeq4 | Protein | 1e-148 | 52 |
| polA | YP_494120.1 | phage related DNA polymerase family A | Not tested | ¥ÕSa2 | Protein | 2e-155 | 49 |
| MW1425 | NP_646242.1 | DNA polymerase | Not tested | ¥ÕSa2 | Protein | 3e-155 | 49 |
