|
Name : CLI_2429 (CLI_2429) Accession : YP_001391671.1 Strain : Clostridium botulinum Langeland Genome accession: NC_009699 Putative virulence/resistance : Virulence Product : virulence-associated protein E Function : - COG functional category : R : General function prediction only COG ID : COG5545 EC number : - Position : 2555998 - 2558421 bp Length : 2424 bp Strand : - Note : identified by match to protein family HMM PF05272 DNA sequence : TTGGAGGCCTATAAAACAGAAGATAAACCTAAGATTAAATATGACGGATCCATAGCTATAGCTACTGGGAAGAGTAGAAA AGAAACTCATTGGAAAAATAAAAATATTTTATGGTCAGAGTTAGTTGGAAAGCTGAGTAATACTACAAGAACACCTGAAA CTTATGCGGAATATAAGAAAATGGCTAAAACTGAAAAAGATATGATTAAAGATGTAGGTGGGTTTGTAGGTGGTGGCCTT AAGAATGGTCGTAGAAAAGCAGAGAACGTTCAGAATAGAACATTATTAACTTTGGACTTAGACTACGTTAAGGGTGATAT ATGGTCAAGCATAGAGTTATTATGGGATTTTTCAGTAGCTATGTATTCAACTCATACTCATGCAGCAGATAATCAAAGAT TAAGATTAGTAATTCCTATAAGTAGACCAGTACTTCCAGATGAATATCAGGCTATATCTAGGATGATAGCTAGTGATCTA GGAATAGATCAATTTGATGATACAACCTATGAACCTAGTAGATTAATGTATTGGCCAAGTACTTCAAGTGATGGAGATTA TATCTTTAAAATCCAGGATGAACCGTGGTTAAATCCTGATGAAATATTAGCTAGATATACTTTTGGGTGGCAAGATGTAA GTTATTGGCCAGAAAGCTCAAGAGCTAGGGCAAAATTAAATAATGCAATAAAAAAGCAAGAAGACCCATTAGAAAAGAAA GGTATTATAGGGGCATTCTGCAGAACCTATACAATAACTGAAGCTATAGCAGAATTTTTAAATGATATTTATGTACCTGG TGCAGATGAAACCAGGTACACATATGCAGAGGGTAGCACTACAGGCGGGGTTGTAGTATATGAGAATAAATTTAGCTATA GCCATCATGGTACGGATCCAGCTAGTAATACTCTATGTAATTCCTTTGACCTAGTTAGAATTCATAAGTTTGGCCATTTA GATGATGAGGCTAAACCAGATACTCCAGCCAATAGAATGCCATCTTTTACTAGAATGAGTGAGTTTGCTAGTTCTGATGA AAAAGTAATGCAGACTTTAGGAAAAGAAAGAATGGAAAAAGCTCAAGAGGATTTTGGTATTGTTGAAACCGAGGAAGTAG ATACAGAATGGCTAAAAAAAATTACTTATACAGAACAAGGCAAGGTAAGAAGTACTATTAGTAACTTTTTATTAATAATA GAAAATGACCCAATGCTTAAAGGGAAGATAGCCTATAATGAATTTTCCAACAGAGCTGTAGTTATTGGCCAACTTCCTTG GAGAAAAAAAGATAATGGATCAGATTGGAATGATACAGATGACAGTGGATTAAGAGAATTTATTGAGAAATATTACAGTA TTTCAAGTACTGCAAAATGCGCTGATGCTTTAGCACTAGTTTTTGAAAAATATTCATTTCATCCCATTAAAGAATATTTA AATAGTCTTAAATGGGATGGTAAAGAGAGAATAAACACTTTATTAATAGATTATCTCGGTGCAGAAGATAGTAATTATGT AAAAACAGTTACAAGGAAAACACTAGTAGGAGCAGTGGCAAGAATTTTTATTCCAGGAATTAAATTTGATACTATGCTTG TTTTAAGTGGACCACAGGGAATAGGTAAAAGCACTATAATAAAAAAACTAGGTAAGGATTGGTATAGTGATAGTTTGACA ACCGTAAGTGGTAAAGAAGCTTATGAACAACTTCAAGGTTTTTGGTTAATTGAAATGGGAGAAATGACAGCAACTAAAAA AGCAGATATTGAAGCAACAAAACATTTTTTATCTAAACAAGAGGATATTTATAGGGTGGCTTATGGTAGAAGAACAAGCC GTTTCCCAAGACAATGTATATTTATAGGTACTACTAATGATAAAGAATTTTTAAGAGATAAAACAGGTTCTAGAAGGTTT TGGCCAGTTGATGTAGGTACTCAAAAACATAATAAATATGTATGGAGTGATTTAACAGATTATGAAATCAATCAAATATG GGCCGAAGCTGTGGAACTATGGAAAAATAAAGAACCTTTAAATTTAAATAATGAAGAGAAAAAAGAAGCCGAAAAACAGC AAGATGCGCATAGTGAAGAAAGCGCAAAAACTGGATTAATTGAAGAATATCTTAATAAGCTATTGCCTGATGATTGGTAT AGTTTAGGATTATCTGAGAGAAGAAATTATATACAAGGTACTGATTTTGGAGAAATCCCGGAGGGTAATTTAAGGCGAGA TAAAACTTGTGTTATGGAAATATGGGTAGAACTTTTCAACGGAGATCCTAAACAGCTTACACCATTACACAGTAGAGAAA TTAACGATATTTTAAAAGGGCTTAAAGGATGGGAAAGACATAAAAGTAAATTGAGATTTGGTAAAGTCTATGGTATTCAA AGAGCTTATATACGTAAAATTTAG Protein sequence : MEAYKTEDKPKIKYDGSIAIATGKSRKETHWKNKNILWSELVGKLSNTTRTPETYAEYKKMAKTEKDMIKDVGGFVGGGL KNGRRKAENVQNRTLLTLDLDYVKGDIWSSIELLWDFSVAMYSTHTHAADNQRLRLVIPISRPVLPDEYQAISRMIASDL GIDQFDDTTYEPSRLMYWPSTSSDGDYIFKIQDEPWLNPDEILARYTFGWQDVSYWPESSRARAKLNNAIKKQEDPLEKK GIIGAFCRTYTITEAIAEFLNDIYVPGADETRYTYAEGSTTGGVVVYENKFSYSHHGTDPASNTLCNSFDLVRIHKFGHL DDEAKPDTPANRMPSFTRMSEFASSDEKVMQTLGKERMEKAQEDFGIVETEEVDTEWLKKITYTEQGKVRSTISNFLLII ENDPMLKGKIAYNEFSNRAVVIGQLPWRKKDNGSDWNDTDDSGLREFIEKYYSISSTAKCADALALVFEKYSFHPIKEYL NSLKWDGKERINTLLIDYLGAEDSNYVKTVTRKTLVGAVARIFIPGIKFDTMLVLSGPQGIGKSTIIKKLGKDWYSDSLT TVSGKEAYEQLQGFWLIEMGEMTATKKADIEATKHFLSKQEDIYRVAYGRRTSRFPRQCIFIGTTNDKEFLRDKTGSRRF WPVDVGTQKHNKYVWSDLTDYEINQIWAEAVELWKNKEPLNLNNEEKKEAEKQQDAHSEESAKTGLIEEYLNKLLPDDWY SLGLSERRNYIQGTDFGEIPEGNLRRDKTCVMEIWVELFNGDPKQLTPLHSREINDILKGLKGWERHKSKLRFGKVYGIQ RAYIRKI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| MW1408 | NP_646225.1 | hypothetical protein | Not tested | ¥ÕSa2 | Protein | 3e-179 | 49 |
| SAUSA300_1410 | YP_494107.1 | virulence-associated protein E | Virulence | ¥ÕSa2 | Protein | 3e-179 | 49 |
| SAOV_0312 | YP_005735829.1 | virulence-associated protein E | Virulence | ¥ÕSa1 | Protein | 2e-180 | 49 |
| SH1781 | YP_253696.1 | hypothetical protein | Not tested | ¥ÕSh1 | Protein | 0.0 | 48 |
