Gene Information

Name : CLI_2425 (CLI_2425)
Accession : YP_001391667.1
Strain : Clostridium botulinum Langeland
Genome accession: NC_009699
Putative virulence/resistance : Unknown
Product : SNF2 domain-containing protein
Function : -
COG functional category : K : Transcription
COG ID : COG0553
EC number : -
Position : 2553929 - 2555293 bp
Length : 1365 bp
Strand : -
Note : identified by match to protein family HMM PF00176

DNA sequence :
ATGGATTTTAAACCTTGGAGTTACCAAGAATATGCAATAAAGCACATAATAAATAATCCAGCAGCAGGTCTATTCCTTGA
TATGGGAATGGGGAAAACTATCAGTACATTAACTGCAATAGATAATTTATTATTTCTTGGAGATATAAATAAAATTTTAG
TAATAGCGCCCTTAAGAGTAGCAGAAGATACTTGGAGTACAGAAGTAGATAAATGGGATCATATTAGTCATTTAAGAGTA
TCAAAAATCTTAGGAACTAAGAAACAGAGAAGAGAGGCTTTAATGAAAGATGCGGATATTTATGTAACTAATAGAGAAAA
TATAGATTGGTTAGTTAATGAATGTTTTAGTAGTTGGTTATGGGATATGGTAGTTATAGATGAGTTAAGTTCTTTTAAAT
CTTCTAAAGCTAAAAGGTTTAGAGCTTTAAAGAAAGTTAGGCCATACTTTAAAAGGATAGTAGGACTTACTGGTACACCA
GCACCTAATAGTTTAATAGATTTATGGCCACAAATTTATTTGTTAGATGGTGGTAAAAGGCTAGGAAAAACTATTACAAG
TTATAGACAGCAATATTTTAATCCAGGAAGAAGAAATCAATATGTAGTTTATAACTGGGAGCTAAAAGAAGGGGCAGAAG
AACAGATCCATAAAAAGATAGGTGATATTTGTATTTCCATGATGGCCAAAGATTATTTAGATATTCCTGCAAGAATTGAC
AATGTCATAAATATTAATTTGCCAAAACAATCTATGGATAAATATAAGCAACTAGAAAAGGATCTTGTAATAGAATTAGG
AGAAGATGATATAACAGCTACAAATGCAGCAGTACTTACTAATAAGTTATTACAAATGTCTAATGGGGCAATATATTCAG
AGGACAAGTCTGTGTTAGAAATTCATGAAGAAAAATTAAAAGCTTTATTAGATATTATAGAGGCAGCCAATGGTAAACCA
GTTTTAATATTTTATAGCTTTAAGCATGATTTTGATAGAATAGTTAATTTCTTAAAAACTAAAAAGTTAAATGCAATAGG
ATTAGAGGATTCAAAGGATATTAAAAAATGGAATAATGGAGAAATACCTATACTTTTAGTACACCCAGCTTCAGCAGGGC
ATGGATTAAATCTTCAATATGGTGGCAATATTATTGTTTGGTTTGGGCTTACATGGAGTTTGGAGTTATATCAACAGGCT
AATGCAAGACTTCATAGACAAGGACAAAAGGAAAGCGTTATAATACATCATCTAGTAAGTAAAGATACTGTAGATGAAGA
TGTTATAAAAGCTTTAGATAGTAAAGAAGTTAATCAGAACGTATTACTAGAAGCAGTAAAAGCAAGATTAAAGGAAAGTA
GGTAA

Protein sequence :
MDFKPWSYQEYAIKHIINNPAAGLFLDMGMGKTISTLTAIDNLLFLGDINKILVIAPLRVAEDTWSTEVDKWDHISHLRV
SKILGTKKQRREALMKDADIYVTNRENIDWLVNECFSSWLWDMVVIDELSSFKSSKAKRFRALKKVRPYFKRIVGLTGTP
APNSLIDLWPQIYLLDGGKRLGKTITSYRQQYFNPGRRNQYVVYNWELKEGAEEQIHKKIGDICISMMAKDYLDIPARID
NVININLPKQSMDKYKQLEKDLVIELGEDDITATNAAVLTNKLLQMSNGAIYSEDKSVLEIHEEKLKALLDIIEAANGKP
VLIFYSFKHDFDRIVNFLKTKKLNAIGLEDSKDIKKWNNGEIPILLVHPASAGHGLNLQYGGNIIVWFGLTWSLELYQQA
NARLHRQGQKESVIIHHLVSKDTVDEDVIKALDSKEVNQNVLLEAVKARLKESR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SEQ_2070 YP_002747285.1 SNF2 family phage protein Not tested ¥ÕSeq4 Protein 1e-115 58
SAOV_0314 YP_005735831.1 putative DNA helicase Not tested ¥ÕSa1 Protein 1e-115 55
SAUSA300_1408 YP_494105.1 phage helicase Not tested ¥ÕSa2 Protein 2e-107 54
MW1405 NP_646222.1 hypothetical protein Not tested ¥ÕSa2 Protein 5e-116 54
SH1779 YP_253694.1 hypothetical protein Not tested ¥ÕSh1 Protein 1e-110 54