|
Name : CLI_0239 (CLI_0239) Accession : YP_001389539.1 Strain : Clostridium botulinum Langeland Genome accession: NC_009699 Putative virulence/resistance : Unknown Product : RNA-binding protein Function : - COG functional category : K : Transcription COG ID : COG2183 EC number : - Position : 207878 - 210034 bp Length : 2157 bp Strand : + Note : identified by match to protein family HMM PF00575 DNA sequence : ATGAACAATATAAACAGTATTTTATCAAAAGAACTTAACATATCCATTAAATATATAGATGCAGTTATAGATTTATTAGA TCAGGGAAATACAGTACCTTTTATAGCAAGATATAGAAAAGAAGTAACAGGAGGTATGAGTGACGAAACGCTTAGAGAGC TCTTTGAAAGGCTTACGTATTTAAGAAATTTAAGTTCCAAGAAAGAGGATGTTATAAGACTCATAGAGGAGCAAGGCAAA CTTACAGAAGAGCTTAAAACATCTATAATTAATTGTAAAACTGTTACAGAAGTAGAGGATTTATATAGACCTTATAGACC AAAAAGAAGGACAAGAGCTACTATAGCAGAAGAAAAAGGATTAAAGCCTTTAGCAGAAATAATATTAGAAGGTAATTTTA AAGAAGATATAAAAGTATATGCTAGTGAATTCATAAATGAAGAAAAAGAAGTAAAGACTATCGAAGAAGCTCTTCAGGGT GCTATGGATATAATAAGCGAAGTTATATCTGATGAAGCAGAATACAGAAAATGGATAAGAAATTTTGTTTTTAATGAAGG AGTAATAGAAACTAAAGGTGAAAGCATGGAACCTACTCCTTACGAAATGTATTATGATTATAAAGAAAATGTAAAAAATA TTCCTCCTCATCGAATACTAGCTATAAATAGAGGAGAAAAAGAAAAAATATTAACAGCAAAAGTTACTTGTAATGAAGAT AAAATAATAGATTATTTAAAAAGTAGATCATTAAAAGGAAATAAGGAAACGGATGTATATATAGAGGAGTCTGTTAAAGA TTCTTTAAAAAGATTAATATATCCATCCATAGAAAGAGAGATAAGATCAGAGTTAACAGAAAAAGGTGAAGAAGGGGCAA TAAAAATATTTAAAGAGAATTTAAAGGCTCTTTTGATGCAAGCACCTATAAAGGATAAAGTAGTTTTAGGATATGACCCA GGGTTTAGAACCGGATGTAAGATAGCAGTATTAGATGAAACAGGAAAATTATTAGATACAGCTACAGTTTATGCTACAGC ACCACAAAATGATGTAGAAGGGTCTATAAAAGTATTAAAAAAATTAATATACAAATATGATGTTGATGTAATATCTTTAG GAAATGGAACAGCTAGTAGAGAATCAGAAGAGGTTATATCAAAAATGCTTAAAGAAATAAAAGAAGAAAAAGGCAAAGAT ATATATTATGTTATAGTATCTGAAGCAGGAGCCTCTGTTTATTCTGCGTCAAAATTAGCTACAGAAGAATATCCAGATAT AAATGTTTCTCTAAGAGGGGCTATATCTATAGGTAGAAGACTTCAAGATCCTCTAGCAGAACTTGTAAAAATAGATCCTA AGTCTATAGGGGTAGGACAATATCAACACGATGTATCTCAAAAAAAATTAGATGAATCATTAAAAGGTGTGGTAGAAGAT TGTGTTAATGCGGTAGGAGTAGACTTAAATACTGCAACACCATCACTTTTATCTTATATTTCAGGCATTAATAGCTCTAT AGCTAAAAATATAGTAGCTTATAGAGAGGAAATAGGGAAATTTAAAAATAGAAAAGAATTATTAAAAGTAAAAAGGTTAG GACAAAAAGCCTTTGAGCAATGTGCAGGTTTTCTTAGAGTCATGGAAAGTAAAGAACCTTTAGATAATACAGGAGTCCAT CCAGAGTCCTATGAGGGAACAAAGAAATTTTTAAGCTTGTTACAATATGATATGAAGGATGTAAAAAATAATAAATTACA GGATATAGATGCTAGAGTTAATAATATAGGTCTAGATGATATATGTAATAAAATAGATATAGGGAAACTTACACTATTAG ATATTATAAAAGAAATAAAAAAACCAGGAAGAGATCCAAGAGAAGATTTACCTAAACCTATATTAAAGACAGGGATTGTT GATATAACTCAATTAAAGCCAGATATGGTTTTAATGGGCACTGTTAGGAATGTAGCTGATTTTGGAGCCTTTGTAGATAT AGGAGTTCATCAAGATGGCTTAGTACATATAAGTCAACTTTCAGATAGCTTTGTAAAACATCCTTTAGATATAGTAAAAG TAGGAGATATAGTAGAAGTTAGAATATTAGAAGTAGATAAAAAGAGAAACAGAATTTCTTTAAGCATGAAAAAATAA Protein sequence : MNNINSILSKELNISIKYIDAVIDLLDQGNTVPFIARYRKEVTGGMSDETLRELFERLTYLRNLSSKKEDVIRLIEEQGK LTEELKTSIINCKTVTEVEDLYRPYRPKRRTRATIAEEKGLKPLAEIILEGNFKEDIKVYASEFINEEKEVKTIEEALQG AMDIISEVISDEAEYRKWIRNFVFNEGVIETKGESMEPTPYEMYYDYKENVKNIPPHRILAINRGEKEKILTAKVTCNED KIIDYLKSRSLKGNKETDVYIEESVKDSLKRLIYPSIEREIRSELTEKGEEGAIKIFKENLKALLMQAPIKDKVVLGYDP GFRTGCKIAVLDETGKLLDTATVYATAPQNDVEGSIKVLKKLIYKYDVDVISLGNGTASRESEEVISKMLKEIKEEKGKD IYYVIVSEAGASVYSASKLATEEYPDINVSLRGAISIGRRLQDPLAELVKIDPKSIGVGQYQHDVSQKKLDESLKGVVED CVNAVGVDLNTATPSLLSYISGINSSIAKNIVAYREEIGKFKNRKELLKVKRLGQKAFEQCAGFLRVMESKEPLDNTGVH PESYEGTKKFLSLLQYDMKDVKNNKLQDIDARVNNIGLDDICNKIDIGKLTLLDIIKEIKKPGRDPREDLPKPILKTGIV DITQLKPDMVLMGTVRNVADFGAFVDIGVHQDGLVHISQLSDSFVKHPLDIVKVGDIVEVRILEVDKKRNRISLSMKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| NMB0075 | NP_273139.1 | transcriptional accessory protein Tex | Not tested | IHT-A | Protein | 2e-153 | 47 |
