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Name : pdp (CLI_1865) Accession : YP_001391123.1 Strain : Clostridium botulinum Langeland Genome accession: NC_009699 Putative virulence/resistance : Unknown Product : pyrimidine-nucleoside phosphorylase Function : - COG functional category : F : Nucleotide transport and metabolism COG ID : COG0213 EC number : 2.4.2.2 Position : 2002706 - 2004010 bp Length : 1305 bp Strand : - Note : identified by match to protein family HMM PF00591; match to protein family HMM PF02885; match to protein family HMM PF07831; match to protein family HMM TIGR02644 DNA sequence : ATGAGAATGTATGATTTGATCCTAAAGAAAAGAAATGGCGGAGAGTTAAGCAAAGAAGAAATAGATTATTTTATTTTAGA ATATACTAATGGTAATGTCCCAGATTATCAAGCTTCAGCTCTTTTAATGGCTATATACTTTCAAAAAATGAAAAGAAGAG AAACTGTAGATTTGACTATGGCTATGGTTAACTCTGGAGATATATTGGATTTATCAAAAATACAGGGTATAAAAGTTGAT AAACATAGTACTGGTGGAGTTGGGGATACTACTACCTTAGTTTTGGCGCCTATGGTAGCAGCCTTAGGTATACCTGTAGC TAAAATGTCTGGTAGAGGTTTAGGTCATACTGGTGGAACTATAGATAAATTAGAATCTTTTAAAGGTTTTTCAGTAAATA TGACAGAGGATAAATTTATAAATAACGTTAACAATATTAAAATAGCTGTAGGAGCTCAAACAGCAGATTTAGCTCCAGCG GATAAAAAATTATATGCATTAAGAGATGTTACTGCTACAGTAGACAATATTTCTTTAATAGCTTCTAGTATAATGAGCAA AAAAATAGCTGCAGGAGCTAATGCCATAATTTTAGATGTAAAGGTTGGAGAAGGAGCCTTCATGAAAACTCCGGAAACTG CAAAAGAGTTAGCGGAAGAAATGGTTAATATAGGTAAAAGTGTAGGTAGAGATACTGTGGCTATATTATCAGATATGGAT CAACCTTTAGGTTATGCTATAGGAAATGCTTTAGAAGTAAAAGAAGCTATAGATACACTAAAAGGTAAAGGTCCTAAGGA TTTATTAGAATTATGTTTAACCTTAGGAAGTAATATGGTTATTTTATCACAAAAAGCAAATACTATAGAGGAAGCAAGAA AGATGCTTTTAAGTACTATAGAAAAAGGATTAGCTATAGAAAAATTAAAAGAATTTATTAGATCTCAAGGCGGAGATGGT ACTTTAGTAGACAATACAGAAAAATTACCTAAGGCAGAATATATAATTCCTGTAATTTGTGATAGAAATGGATATATAAA TAAAATTCATGCTCAAAATATAGGGATAATAGCATCAGAGTTAGGAGCAGGAAGGGTTACAAAGGATAGCATTATAGATT TAGCAGTAGGTATAGTTTTAAACAAGAAGAGATCAGATAAAGTTAAAAAAGGAGATATAATAGCTTATATTCATGCTAAT GATAAAATAAAAGGAGAAAAGGCTGAAAAAGATATATTAAATAATTATGTTATAGAAGAAGAGTTAAAAGAAGAATTACC TTTAATATATGATACAGTAAAATAG Protein sequence : MRMYDLILKKRNGGELSKEEIDYFILEYTNGNVPDYQASALLMAIYFQKMKRRETVDLTMAMVNSGDILDLSKIQGIKVD KHSTGGVGDTTTLVLAPMVAALGIPVAKMSGRGLGHTGGTIDKLESFKGFSVNMTEDKFINNVNNIKIAVGAQTADLAPA DKKLYALRDVTATVDNISLIASSIMSKKIAAGANAIILDVKVGEGAFMKTPETAKELAEEMVNIGKSVGRDTVAILSDMD QPLGYAIGNALEVKEAIDTLKGKGPKDLLELCLTLGSNMVILSQKANTIEEARKMLLSTIEKGLAIEKLKEFIRSQGGDG TLVDNTEKLPKAEYIIPVICDRNGYINKIHAQNIGIIASELGAGRVTKDSIIDLAVGIVLNKKRSDKVKKGDIIAYIHAN DKIKGEKAEKDILNNYVIEEELKEELPLIYDTVK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| deoA | YP_005163381.1 | Thymidine phosphorylase | Not tested | Not named | Protein | 5e-74 | 45 |
