Gene Information

Name : CLI_1397 (CLI_1397)
Accession : YP_001390662.1
Strain : Clostridium botulinum Langeland
Genome accession: NC_009699
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1464919 - 1465584 bp
Length : 666 bp
Strand : +
Note : identified by match to protein family HMM PF00005

DNA sequence : 
ATGGAAATATTAAAGGCTAAAGGACTAAAAAGGTATTATGGCAGTGGTGAAAATATAGTTAAAGCAGTAAATAATATTAA
TTTTTCTGTAGAAGAAGGAGAATTTGTAGCTATAGTAGGAACTTCAGGTTCGGGGAAAAGTACTCTTTTGCACCTTTTAG
GTGGCCTTGATAGTCCTACAGATGGAGAAGTGATTATAGATAAAAAAAGTATTTATAAAATGAATAAGGATAGTTTAGCT
GTATTTAGAAGAAGAAAAATAGGCTTTATTTTTCAACAATTCAATTTAGTACCGGTTCTAAATGCTTATGAGAATATAGT
ATTACCGATAAGATTGGATAATAATAATGTTGATAAACAATATGTAGATGAAATAATATCATTGCTCAACTTAGAAAAAA
GGAGATATCATTCACCTAATGCTTTATCTGGAGGTCAACAACAGAGAGTTGCTATAGGTAGAGCTCTTGCTACTAAACCA
TCAATTATTCTGGCAGATGAACCTACTGGAAATTTGGATTCTAAAACAGGAGAAGAGGTTTTAGGTTTACTAAAAAAATC
TATAAAGAAATATCATCAAACCCTCCTTATGATTACTCATGATGAAAATATTGCATTAGCAGCAGATAGAGTAATTCGTA
TAGAAGATGGAAAGATTGCGGAATAA

Protein sequence : 
MEILKAKGLKRYYGSGENIVKAVNNINFSVEEGEFVAIVGTSGSGKSTLLHLLGGLDSPTDGEVIIDKKSIYKMNKDSLA
VFRRRKIGFIFQQFNLVPVLNAYENIVLPIRLDNNNVDKQYVDEIISLLNLEKRRYHSPNALSGGQQQRVAIGRALATKP
SIILADEPTGNLDSKTGEEVLGLLKKSIKKYHQTLLMITHDENIALAADRVIRIEDGKIAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-37 46
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-38 45
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-38 45
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-38 45
unnamed AAP55232.1 unknown Not tested SaPIbov2 Protein 9e-32 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CLI_1397 YP_001390662.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 4e-69 62
CLI_1397 YP_001390662.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 8e-63 57
CLI_1397 YP_001390662.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 2e-36 47
CLI_1397 YP_001390662.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 4e-33 43