Gene Information

Name : CLI_1309 (CLI_1309)
Accession : YP_001390574.1
Strain : Clostridium botulinum Langeland
Genome accession: NC_009699
Putative virulence/resistance : Resistance
Product : oligopeptide ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1376868 - 1377542 bp
Length : 675 bp
Strand : -
Note : identified by match to protein family HMM PF00005

DNA sequence :
TTGAGTATAATTAAAGCTACTGATGTAAAAAAAACTTTTACTATAGGCAAGATGAAAGTAGACATACTTAAAGGGGTTTC
TGTAAAAATTGAAAAGGGTGAATTTGTTGCTATCATTGGTGAGTCTGGTTCTGGTAAATCTACCTTTCTAAATATATTAG
GTGGTTTAATGCCTCCTTCCTCTGGCGATATTTTTATTGAAAATGAAAAAATCAATGGTCTTTCTGAAAATAATTTAGCT
TTATTTAGAAGACATAATATAGGCTTTGTTTTTCAGTCCTATAATTTAATCCCTCAACTTACAGCTTTAGAAAATGTGGA
AATGCCTCTTATTTTTTCAGGGATTTCTAAAAAAGAACGAAAAAATAGAGCCTTTGAAATGCTTAAAAAAGTTGGACTTG
AAGAAAGAGCTCATCATAAGCCTTCTGAACTATCCGGTGGACAACAGCAAAGGGTTTCCATTGCTAGAGCTCTAGTAAAC
TATCCTAAAATAGTGCTTGCTGATGAACCTACTGGAAATTTAGATAGCAAAAATGGTACAGAAATTCTAAATATATTAAA
AGAATTAAACCAAACCACTGGACAAACCTTTGTAATTGTTACTCACTCTTCTCAAGTTTGTGATTATGCAAATAAAATAA
TAAAAGTGGTAGACGGAAAAGTATTCAATAACTAA

Protein sequence :
MSIIKATDVKKTFTIGKMKVDILKGVSVKIEKGEFVAIIGESGSGKSTFLNILGGLMPPSSGDIFIENEKINGLSENNLA
LFRRHNIGFVFQSYNLIPQLTALENVEMPLIFSGISKKERKNRAFEMLKKVGLEERAHHKPSELSGGQQQRVSIARALVN
YPKIVLADEPTGNLDSKNGTEILNILKELNQTTGQTFVIVTHSSQVCDYANKIIKVVDGKVFNN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-37 45
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-38 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-38 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-38 44
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 3e-27 43
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 2e-26 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CLI_1309 YP_001390574.1 oligopeptide ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 2e-50 50
CLI_1309 YP_001390574.1 oligopeptide ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 9e-47 48
CLI_1309 YP_001390574.1 oligopeptide ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 4e-42 47
CLI_1309 YP_001390574.1 oligopeptide ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 2e-48 46
CLI_1309 YP_001390574.1 oligopeptide ABC transporter ATP-binding protein NC_012469.1.7685735. Protein 2e-37 42