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Name : CLI_1143 (CLI_1143) Accession : YP_001390409.1 Strain : Clostridium botulinum Langeland Genome accession: NC_009699 Putative virulence/resistance : Resistance Product : ABC transporter ATP-binding protein/permease Function : - COG functional category : V : Defense mechanisms COG ID : COG1132 EC number : - Position : 1183620 - 1185422 bp Length : 1803 bp Strand : + Note : identified by match to protein family HMM PF00005; match to protein family HMM PF00664 DNA sequence : ATGAACAAGAAAAAGAAAGGTATTCCAAGGCTATTGGAAATAGCTGGAGAAAAGCAAGGGCTACTTATTTGCTCATCCAT ATTTTCAGCTATCAGTGCAATTTTAATGCTATTACCATATATAGCGGTTTATTTTATAATGGCGGAACTTTTAAAAAATG CTGCAAACCCTAGAAATGTTAATTCTGCACAAATGCTACACTGGGGTACTGTTGCTCTTGTAGGATTGGTAGGAGGAATT GTTTTCATGTATATATCTGGGTTAATGTCTCATACAGCAGCATACAAGATATTATATAGCTTAAGAGTTCGTATGTCAGA GCATATTGGTAAATTACCTCTAGGCTATTTAAGCAACACATCAACGGGTATAGTAAAGAAAACCTTTGAACAAAATGTAG AAAAGATTGAAGCCTTTGTTGCTCACCAGTTACCGGATATGGTAAATGTATTTGTAACAATGATTATTACAATAATTATG ATGCTAACTTTAAATCCATGGCTTACATTGGCTGCTATGGTACCACTTGTTTTGGGATTCTTAATACAGATGAAAAAAAG AAGTGGTAAGGCTGCAGAGGAAAGTGCAAAAAAATACTATAATGCCTTAGAGAGAATCAACTCATCAACTATTCAATATG TAAAGGGAGTGCCTGCTGTAAAGATATTTGGTAGAAACGTATATTCTTTTCGCAAATTTTATGATGATATGATATCTTAC AGGGATTATTGTGTAAAGTATACAGATCAGTATCAAAATACCTATATAACTTCAAAGGTATTATTAAATTCAACTTTAAC ATTTATATTACCAGTGGGTATTCTTTTAATGGGAGGAAGATCAGGAGATCTTTCATTTGTACAAACTCTTTTATTTTTTA TTATTTTAGCACCAGGAGTTGCGTCACCTATGTTGCGTTTTATGACTTTTGCATCTTCATTAGGAGATATTTCTGAGGGA GTTCAGCGTATTGATAAGATTTTTGCTGAGAAAACTATTTGTGAGGCAAAGAATCCTAGGATACCTTCCTCTTATGATAT TGAGTTTGATAATGTGTCCTTTTCTTATGAGTCTGAGGACACATCCACTAGGAAAGAAGCATTATCAAAAGTAAGTTTTA AGGCGAAAAAAGGTTCATGTACAGCACTTGTAGGACCTTCAGGCTCTGGAAAATCTACAGTGGCTAACCTTATTCCACGT TTTTGGGATATTCAAAAAGGTCATATTAGAATCGGTGGAATAGATATTAAAGAAATTTCTACAGAGAATTTGATGGATTT AGTTTCCTTTGTTTTTCAAGATACATTTTTATTTCATGATACCTTATATGAAAATATCCGTGTAGGCAGACCAGATGCCA CAAAGGAAGAAATATTTAAGGCTGCAAAAGCTGCTCAGTGTCATGAGTTTATTACAGGACTTGAAAATGGTTATGACACT ATTGTTGGTGAAGGAGGCACTCATCTTTCAGGTGGTGAAGAACAAAGAGTATGTGTGGCAAGAGCAATTTTAAAAAATTC TCCTATACTAGTTTTAGATGAAGCTACTGCTTTTTCAGATCCAGAAAATGAGTATCATATGCAGCTGGCTCTAAGAGAGC TTATGAAGAATAAAACTGTTATTATGATTGCACATAGGCTAACAACTATTAAAGATGCTGAGAATATAGTGGTTATGGAA GATGGAACTATTGTAGAGACGGATACTCATGATGTACTTATAAATAAAGATGGATTGTATAAAAAGCTTTGGAATTCATA TACAGTGGCCTCTAATTGGGGTATAAGTAAAGGAGGAATTTAG Protein sequence : MNKKKKGIPRLLEIAGEKQGLLICSSIFSAISAILMLLPYIAVYFIMAELLKNAANPRNVNSAQMLHWGTVALVGLVGGI VFMYISGLMSHTAAYKILYSLRVRMSEHIGKLPLGYLSNTSTGIVKKTFEQNVEKIEAFVAHQLPDMVNVFVTMIITIIM MLTLNPWLTLAAMVPLVLGFLIQMKKRSGKAAEESAKKYYNALERINSSTIQYVKGVPAVKIFGRNVYSFRKFYDDMISY RDYCVKYTDQYQNTYITSKVLLNSTLTFILPVGILLMGGRSGDLSFVQTLLFFIILAPGVASPMLRFMTFASSLGDISEG VQRIDKIFAEKTICEAKNPRIPSSYDIEFDNVSFSYESEDTSTRKEALSKVSFKAKKGSCTALVGPSGSGKSTVANLIPR FWDIQKGHIRIGGIDIKEISTENLMDLVSFVFQDTFLFHDTLYENIRVGRPDATKEEIFKAAKAAQCHEFITGLENGYDT IVGEGGTHLSGGEEQRVCVARAILKNSPILVLDEATAFSDPENEYHMQLALRELMKNKTVIMIAHRLTTIKDAENIVVME DGTIVETDTHDVLINKDGLYKKLWNSYTVASNWGISKGGI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| smi_1698 | YP_003446800.1 | multidrug ABC transporter ATPase/permease | Not tested | The aminoglycoside resistance gene cluster | Protein | 4e-114 | 43 |
