Gene Information

Name : CLI_1055 (CLI_1055)
Accession : YP_001390321.1
Strain : Clostridium botulinum Langeland
Genome accession: NC_009699
Putative virulence/resistance : Resistance
Product : DNA-binding response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1093159 - 1093881 bp
Length : 723 bp
Strand : +
Note : identified by match to protein family HMM PF00072; match to protein family HMM PF00486

DNA sequence : 
ATGGAGACAATATCTTTAAGTAATAAAAAAATATTAATAATTGATGATGAAGAAGATATAGTTAGATTAATAAGAACAGT
ACTAAAAAAAGAAGGATTTCAGAATATATATTATGCTACTAACTTAGAAGATGGATTTAAAGAATTTAATAAGGTAGAGC
CAGATATTGTAATTTTAGATATTATGTTACCAGATGGTGAGGGATATGAATTATGTAAAACAATAAGATCTAAATCTAAG
GTGCCCATACTATTTTTATCTGCTAAGGGTGAAGAAATAGATAAAATATTAGGATTTGCTATAGGGGGAGACGATTATAT
AACTAAACCTTTTAGCACAAAGGAGTTAGCCTATAGGGTGAAGGCTCATTTAAGAAGATATTCCTATGTGGAAAATGTTA
ACGAGGAAAAAAACATTTTATCCTTTGGGCCCTTTGAGCTAAATATAAGTAAGGCAGAATTTAAAAAAGATGGGGAAATT
ATAGAATTAAAACCTAAAGAATTAGCATTAATAAGTTTTTTTGCAAAACATCCAAATCAAATAATAAGTAAAGAAAAAAT
TTGTGATAATGTTTGGGGAGAAGACTACTATGGATTCGATAATACTATAATGGTTCATATTAGAAGACTTAGAGAAAAAA
TTGAAAAAGAACCATCAAAGCCAGAGTATTTAATAAATGTTAAAGGTTTAGGGTACAAATTGGTGATAAAAAATGAAAAA
TAA

Protein sequence : 
METISLSNKKILIIDDEEDIVRLIRTVLKKEGFQNIYYATNLEDGFKEFNKVEPDIVILDIMLPDGEGYELCKTIRSKSK
VPILFLSAKGEEIDKILGFAIGGDDYITKPFSTKELAYRVKAHLRRYSYVENVNEEKNILSFGPFELNISKAEFKKDGEI
IELKPKELALISFFAKHPNQIISKEKICDNVWGEDYYGFDNTIMVHIRRLREKIEKEPSKPEYLINVKGLGYKLVIKNEK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sboR YP_006309915.1 SboR Not tested FWisland_1 Protein 4e-39 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CLI_1055 YP_001390321.1 DNA-binding response regulator NC_012469.1.7685629. Protein 7e-38 44
CLI_1055 YP_001390321.1 DNA-binding response regulator NC_012469.1.7686381. Protein 1e-31 41