Gene Information

Name : CLC_1024 (CLC_1024)
Accession : YP_001386892.1
Strain : Clostridium botulinum Hall
Genome accession: NC_009698
Putative virulence/resistance : Resistance
Product : DNA-binding response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1041562 - 1042284 bp
Length : 723 bp
Strand : +
Note : identified by match to protein family HMM PF00072; match to protein family HMM PF00486

DNA sequence : 
ATGGATGCAATATCTTTAAATAATAAAAAAATATTAATAATCGATGATGAAGAAGATATAGTTAGATTAATAAGAACAGT
ACTTAAAAAAGAAGGATTTCAAAATATATATTATGCTACTAACTTAGAAGATGGATTTAAAGAATTTAATAAGGTGGAGC
CAGATATTATAATTTTAGATATTATGTTACCAGATGGGGAAGGGTATGAATTATGTAAAACAATAAGAGCTAAATCTAAG
GTACCCATACTATTTTTATCTGCTAAGGGTGAAGAAATAGATAAAATATTAGGATTTGCTATAGGTGGAGATGATTATAT
AACTAAACCTTTTAGTACAAAGGAGTTAGCCTATAGGGTAAAGGCTCATTTAAGAAGGTATTCCTACGTGGAAAATGCTA
ACGAGGAAAAAAATATTTTATCCTTTGGGCCCTTTGAGCTAAATATAAGTAAGGCAGAATTTAAAAAAGATAGGGAAATT
ATAGAATTAAAACCTAAAGAACTAGCATTAATAACTTTTTTTGCAAAGCATCCAAATCAAATAATAAGTAAAGAAAAAAT
TTGTGATAATGTTTGGGGAGAAGACTATTATGGATTTGACAATACTATAATGGTCCACATTAGAAGACTTAGAGAAAAAA
TTGAAAAGGAACCATCAAGACCAGAGTATTTAATAAATGTTAAAGGTTTAGGATACAAATTGGTGATAAAAAATGAAAAA
TAA

Protein sequence : 
MDAISLNNKKILIIDDEEDIVRLIRTVLKKEGFQNIYYATNLEDGFKEFNKVEPDIIILDIMLPDGEGYELCKTIRAKSK
VPILFLSAKGEEIDKILGFAIGGDDYITKPFSTKELAYRVKAHLRRYSYVENANEEKNILSFGPFELNISKAEFKKDREI
IELKPKELALITFFAKHPNQIISKEKICDNVWGEDYYGFDNTIMVHIRRLREKIEKEPSRPEYLINVKGLGYKLVIKNEK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sboR YP_006309915.1 SboR Not tested FWisland_1 Protein 2e-33 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CLC_1024 YP_001386892.1 DNA-binding response regulator NC_012469.1.7685629. Protein 3e-30 44
CLC_1024 YP_001386892.1 DNA-binding response regulator FJ349556.1.orf0.gene Protein 3e-28 42