Gene Information

Name : CLC_3158 (CLC_3158)
Accession : YP_001388977.1
Strain : Clostridium botulinum Hall
Genome accession: NC_009698
Putative virulence/resistance : Unknown
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1116
EC number : -
Position : 3329189 - 3329947 bp
Length : 759 bp
Strand : -
Note : identified by match to protein family HMM PF00005

DNA sequence :
ATGAGGTTAGAAATAAAGGATGTTAGTAAATCTTACATAAATAATAAGAAAAAAAATAAAGTTTTAGATAATGTAAGTTT
TAATATAGAAGAAGGAGAATTTGTAACATTACTAGGTCCATCCGGTTGTGGAAAAACAACACTTTTAACGATGATTGCAG
GTTTTCATAATTCAGATTCTGGTGAAATAATTTTAAATGATAATAGGGTAATAAAACCTGGTCCAGACAGAGGCTTTGTT
TTTCAAAATTATGCATTATTCCCATGGATGACTGTAAAAGATAATATAATGTACCCTATGAAACAACAAAAAATTCCTAA
AAAGGAATCTATAGATAGGTTAAATTATTTATTAGAGATGTCTAAGCTAAAAGGAAAAGAAAATTTATACCCTAATCAAT
TATCAGGTGGTATGAAACAAAGAACTGCAGTAGTAAGAGCACTAGCTAGTAAACCAGAGGTATTACTTATGGATGAGCCT
TTGGGTGCTATAGATTTTCAAATGAGGCAAATGATGCAAGAAGAGTTAGAAAGTTTATGGTTAAAGGATAAAACTACAGT
TATAATGGTAACTCATGATGTCGACGAAGCAGTATACCTAAGTGATAGGATAATTGTTTTTGCAGCTAAGGGAGGAAAAA
TTATAAAAGATATGAAAATTAGTTTACCAAGACCAAGAAATAGGGATAACCATAAATATCTAGAATTAAAAAAGGAATTA
ACTAGCATATTAAAGGATTCATTAAGTTCAAATTTATAA

Protein sequence :
MRLEIKDVSKSYINNKKKNKVLDNVSFNIEEGEFVTLLGPSGCGKTTLLTMIAGFHNSDSGEIILNDNRVIKPGPDRGFV
FQNYALFPWMTVKDNIMYPMKQQKIPKKESIDRLNYLLEMSKLKGKENLYPNQLSGGMKQRTAVVRALASKPEVLLMDEP
LGAIDFQMRQMMQEELESLWLKDKTTVIMVTHDVDEAVYLSDRIIVFAAKGGKIIKDMKISLPRPRNRDNHKYLELKKEL
TSILKDSLSSNL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 2e-25 42
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 5e-45 41
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 4e-26 41