Gene Information

Name : CLC_0333 (CLC_0333)
Accession : YP_001386228.1
Strain : Clostridium botulinum Hall
Genome accession: NC_009698
Putative virulence/resistance : Virulence
Product : peptide ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 315585 - 316355 bp
Length : 771 bp
Strand : +
Note : identified by match to protein family HMM PF00005

DNA sequence : 
ATGTCAATTTTAAAAGTTGAAAATATAACAAAAATATATGGTGGAAAAAAGGGTGGAATGAAATTTAAAGCGCTAGATAA
ATTTAGTTTAGAAATTGAAAAAGGGGAATTCGTGGGAGTAATGGGACCTTCAGGTAGTGGTAAAACCACATTGTTAAATA
TAATGGCAACTATAGATACTCCTACATCAGGAGAACTTTTTATAAATGGTACAAATCCTATAAAATTAAATGAGAAAAAT
ATTGCTCTGTTTAGAAGAAAAGAACTAGGTTTTATATTTCAAGATTTTAATCTCTTAGATTCTTTGTCTATTAAGGAAAA
TATAATATTACCACTTGTATTAGAGAAGATTAAAGTACGTGAAATAGAAAAGAAAGTAGAAGACATTGCAAATCTTTTAA
ATATTAAAGATATTTTAAATAAAAAGCCTTATGAAATTTCAGGAGGTCAGCAGCAAAGAGCAGCCTGTGCTAGAGCACTT
ATTCATAATCCTTCTATAATCTTAGCGGATGAACCTACAGGAAATCTTGATTCTAAAGCATCTCAAGATGTTATGGAAAC
TTTAACAAATCTAAATGATAAAAAAGAAGCTACTATAATGATGGTTACTCATGATCCTTTTTCTGCAAGTTTTTGCAAAA
GAATAATTATGATTAAGGATGGAAAGTATTTTTTAGAAATTGTGAATGGAGGAAATAGGCAAGCATTTTTTAAGGAAATT
ATGGATTCTCTTTCACTGTTAGGAAGTAGATCAAACAATTATACATTGTAG

Protein sequence : 
MSILKVENITKIYGGKKGGMKFKALDKFSLEIEKGEFVGVMGPSGSGKTTLLNIMATIDTPTSGELFINGTNPIKLNEKN
IALFRRKELGFIFQDFNLLDSLSIKENIILPLVLEKIKVREIEKKVEDIANLLNIKDILNKKPYEISGGQQQRAACARAL
IHNPSIILADEPTGNLDSKASQDVMETLTNLNDKKEATIMMVTHDPFSASFCKRIIMIKDGKYFLEIVNGGNRQAFFKEI
MDSLSLLGSRSNNYTL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAP55232.1 unknown Not tested SaPIbov2 Protein 1e-27 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CLC_0333 YP_001386228.1 peptide ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 1e-34 48
CLC_0333 YP_001386228.1 peptide ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 3e-34 44
CLC_0333 YP_001386228.1 peptide ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 7e-36 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CLC_0333 YP_001386228.1 peptide ABC transporter ATP-binding protein VFG0869 Protein 1e-14 41