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Name : CLC_3011 (CLC_3011) Accession : YP_001388838.1 Strain : Clostridium botulinum Hall Genome accession: NC_009698 Putative virulence/resistance : Virulence Product : exopolysaccharide biosynthesis protein Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1086 EC number : - Position : 3169006 - 3170871 bp Length : 1866 bp Strand : - Note : identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993 DNA sequence : ATGAGAAAAGATAGAGAATTGATTCTTTATGATATATTATTAATAATTTTATCATTATATTTAGCAATTTTATTAAGATT CGATTTCGGTATGGCTTCTATGGCTTCGGAATTTAAAAAATATATGATATTTTTTAAGTTATCAGTAATTCCAGTTATAA TAATAATCTTATTTTTTAATAAAATATTTAATTTATATAGTAGTATATGGAAATATGCTTCAGTAGAAGAACTTATGTCT ATAATTTATTCAGTTTCTATATCTAATATTATATTCATAATTTATAGTTATTTTATTAATTATAAAGTTCTAGAAAGTAA TTATTATAGATTCCCATTTACTGTACATATAATATTTTGGATTCTATCTATAGTATCCCTAGGAGGTACAAGATTTATAT ATAGAGTTATAGAAGATAAGGAATGTAATAAGAACAAATGTAACTGTGATTCTAAAGAAAAGAAGTTACTTATAATAGGG GCAGGGGATGCAGCAGCTCTCATTATAAAAGAAATAAAAAGAAATAAGGAATTAAATTATAGTATAATAGGTCTTGTAGA TGATGATATAGAGAAGTTAGGAAAGAGAATAAATGGTATACCTGTTTTAGGGGGAAGAGAAAGTATTATAAAGATATCTA AAAATAAAAAAATAGATGAAATAATATTAGCTATACCTTCAGCAGCATCTTCAACAAAAAGTGAAATAGTATCTATATGT AAAGAAACTAGTTGTAAATTAAAAACTTTACCAAGCATGGATAAGGTAATACAGGGTAAATTTAATATGAGCAAGTTAAG AGATGTAAGTATTGAGGATTTGCTTGGGAGAGAGGAAGTTAAACTAGATGATAGTGGAATAAATAGATATATAAAGGATA AAGTAGTTTTAGTTACTGGTGGAGGAGGGTCTATAGGTTCAGAACTTTGTAGACAAATAGTTAAATTTTCACCTAAAAAA CTTTTAATATTAGATATATATGAAAACAATGCATATGATGTCCAAATGGAACTAAATTATAAATATCCAGAACTGGACAA AGCTGTTATAATAGCTTCTATAAGGGATGAAAAGAGGCTAAGAAATATATTTTCATTATATAAACCAGATGTAGTTTTTC ATGCAGCAGCCCATAAGCATGTTCCACTAATGGAAGAGAATCCAGCAGAATCTATTAAAAATAACGTAATAGGTACCTAT AATCTAATAAAATGTGCCCATGAATTTGGGATTGAGCGTTTTGTACAAATAAGTACAGATAAAGCTGTTAATCCAACTAA TATAATGGGAGCTACAAAAAGATTTTGTGAAATAATGATTCAAGCTTTTGATAAAATAAGTAAAACTGAATTTGTAGCTG TTAGATTTGGGAATGTTTTAGGAAGTAATGGATCTGTTATTCCATTATTTAAAAAACAAATATCTCATGGAGGACCTGTC ACTGTAACTCATCCAGAAATAAATAGATATTTTATGACTATACCAGAAGCAGCTCAATTAGTTATACAAGCAGGAGCTAT GGCAAAAGGTGGAGAAATATTTGTTCTGGATATGGGAAAACCAGTTAAAATTGTAGATTTAGCTAAAGATTTAATAACTT TATCTGGATATAAGCCAGAGGAAGATATTAAGATTGAATACACAGGATTAAGACCTGGGGAAAAATTATATGAAGAACTA TTAATGGATGAAATAGCTTTAACATCAACAGGACATAATAAAATATTTGTAGAAAAACCTATGGAAAATAATATAGACTT TGTAGAAAAATCCATAGAAGAATTTAAAAAAGTTGTTTATAATGATGAAGAAGAAATATTTGCATTGATAGAAAAGAAGG TTCCAACATATATAAGAAAAAAATAA Protein sequence : MRKDRELILYDILLIILSLYLAILLRFDFGMASMASEFKKYMIFFKLSVIPVIIIILFFNKIFNLYSSIWKYASVEELMS IIYSVSISNIIFIIYSYFINYKVLESNYYRFPFTVHIIFWILSIVSLGGTRFIYRVIEDKECNKNKCNCDSKEKKLLIIG AGDAAALIIKEIKRNKELNYSIIGLVDDDIEKLGKRINGIPVLGGRESIIKISKNKKIDEIILAIPSAASSTKSEIVSIC KETSCKLKTLPSMDKVIQGKFNMSKLRDVSIEDLLGREEVKLDDSGINRYIKDKVVLVTGGGGSIGSELCRQIVKFSPKK LLILDIYENNAYDVQMELNYKYPELDKAVIIASIRDEKRLRNIFSLYKPDVVFHAAAHKHVPLMEENPAESIKNNVIGTY NLIKCAHEFGIERFVQISTDKAVNPTNIMGATKRFCEIMIQAFDKISKTEFVAVRFGNVLGSNGSVIPLFKKQISHGGPV TVTHPEINRYFMTIPEAAQLVIQAGAMAKGGEIFVLDMGKPVKIVDLAKDLITLSGYKPEEDIKIEYTGLRPGEKLYEEL LMDEIALTSTGHNKIFVEKPMENNIDFVEKSIEEFKKVVYNDEEEIFALIEKKVPTYIRKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 3e-90 | 47 |
| cap1D | AAA64643.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 2e-90 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| CLC_3011 | YP_001388838.1 | exopolysaccharide biosynthesis protein | VFG1300 | Protein | 6e-87 | 44 |
