Gene Information

Name : nagE (CLC_2715)
Accession : YP_001388551.1
Strain : Clostridium botulinum Hall
Genome accession: NC_009698
Putative virulence/resistance : Unknown
Product : PTS system N-acetylglucosamine-specific transporter subunit IIBC
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG1263
EC number : 2.7.1.69
Position : 2863218 - 2864660 bp
Length : 1443 bp
Strand : +
Note : identified by match to protein family HMM PF00367; match to protein family HMM PF02378; match to protein family HMM TIGR00826; match to protein family HMM TIGR01998

DNA sequence :
ATGGCAAAAAACAGTAAATTTTTATCAAAAATTCAAAGGCTAGGAAAATCTCTTATGACTCCTATTGCTGTATTACCAGC
AGCTGCTTTACTACTTAGGTTAGGTCAGCCCGATATCTGGAGTTGGGCTGGTTCTTTACCAAGTGGTATTCCTTGGATGT
CTTCAGCAGGTTCCGCAATTTTTGATAACTTATCCCTTATTTTTGCTATAGGCATAGCTGTAGGATTGGCAGAGGAAAAT
AATGGCGTTGCTGCGATTTCTGCTACTGTTGGCTACCTTGTGCTAACAAATGTTTCTTTAAAATTTGATGATACAATTAA
TATGGGAGTTTTATCAGGTATAATTGTAGGTATATTATCTGCATCACTTTATAATAAATATAAAAATATTAAACTTCCAG
ATTATCTAGGTTTCTTTGGAGGGAAACGTTTTGTTCCAATTATAACTTCTTTATACTCTTTAATTTTAGGTATTATATCA
GGATTTGTATGGCCTCCAATTCAAAATGTTATAAATAATTTTGGTAACGCAGTTGCAGGAGCCGGTGCCATCGGAGCATT
TTTCTTTGGATTATTTAATAGATTGTTGATTCCAACTGGATTACACCATATTATGAACACAATATTTTGGTTCCAATTTG
GTACATTTAAAAATCCAGCAGGTAAAATTGCTAATGGAGATTTAAATAGATTTTTCGCTGGAGATCCTACTGCAGGAACT
TATATGACTGGTTTTTTTGTAATAATGATGTTTGCTCTTCCTGCAGCCTGTTTTGCTATGGTCAAAGCTGCTAGGGAAGA
AAATAAAAAAGCAGTTTCAGGTATGCTTTTAGGTTTAGCATTTACTGCATTCCTTACAGGAGTTACTGAACCAATAGAAT
TTACTTTTATGTTTATTTCTCCTGTTCTTTATGCAATACATGCTTTGTTAACTGGTATAGCCCTAGCCCTTACATCAGGC
TTAGGAATAAAATGTGGATTTGGATTTTCTGCAAGTCTTATAGATTATGGTCTTAATTTTGGTATATCAACTAAACCACT
ATTTATAATTCCCATAGGTTTAATATTTGCAGCAATATACTACTTTTTATTCTTATTCTTTATAAAAAAATTCAATTTAC
CTACACCAGGAAGGGAATTAGATTCAGAAGTTAATACAAATATCAATGTTGATACGCCTAAAAAAAGTGGACACTCTAAA
TTAGAAGATAAAGCTAAAGGAATACTAAACGCTATCGGTAATTCTGAAAATATTGATTCTATAGATGCTTGTGTAACTAG
AATAAGACTTGTTGTTTTTGATGGAAGCAAAATAAATGAAGCTAAACTTAAAGAATTAGGCGCTAATGGAATTATGAAGC
TTGATGATAAAAATTTCCAAATAGTGGTTGGTACTATAGCTGACCCTTTAGTATCTCAAATGAAACTATTAATGAAAAAA
TAA

Protein sequence :
MAKNSKFLSKIQRLGKSLMTPIAVLPAAALLLRLGQPDIWSWAGSLPSGIPWMSSAGSAIFDNLSLIFAIGIAVGLAEEN
NGVAAISATVGYLVLTNVSLKFDDTINMGVLSGIIVGILSASLYNKYKNIKLPDYLGFFGGKRFVPIITSLYSLILGIIS
GFVWPPIQNVINNFGNAVAGAGAIGAFFFGLFNRLLIPTGLHHIMNTIFWFQFGTFKNPAGKIANGDLNRFFAGDPTAGT
YMTGFFVIMMFALPAACFAMVKAAREENKKAVSGMLLGLAFTAFLTGVTEPIEFTFMFISPVLYAIHALLTGIALALTSG
LGIKCGFGFSASLIDYGLNFGISTKPLFIIPIGLIFAAIYYFLFLFFIKKFNLPTPGRELDSEVNTNINVDTPKKSGHSK
LEDKAKGILNAIGNSENIDSIDACVTRIRLVVFDGSKINEAKLKELGANGIMKLDDKNFQIVVGTIADPLVSQMKLLMKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ef0067 AAM75272.1 EF0067 Not tested Not named Protein 2e-55 41