Gene Information

Name : CLC_2676 (CLC_2676)
Accession : YP_001388514.1
Strain : Clostridium botulinum Hall
Genome accession: NC_009698
Putative virulence/resistance : Unknown
Product : pyridoxal biosynthesis lyase PdxS
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0214
EC number : -
Position : 2814630 - 2815484 bp
Length : 855 bp
Strand : -
Note : with PdxT forms pyridoxal 5'-phosphate from glutamine, either ribose 5-phosphate or ribulose 5-phosphate, and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate

DNA sequence :
ATGGAAAAAAATTTAGCTCAAATGCTTAAGGGTGGAGTTATAATGGATGTTGTAAATCCAGAGCAAGCAAAAATTGCAGA
GGAAGCTGGGGCTGTAGCTGTTATGGCATTAGAAAGGGTTCCATCAGACATTAGAAAACAAGGGGGAGTAGCTAGAACTT
CCGATCCTAAGATGATAAAAGAAATAATAAATGCAGTTTCAATACCGGTTATGGCAAAGGTTAGAATAGGTCATTTTGTA
GAAGCTCAAATATTAGAAGCTATAGGAGTAGATTGTATAGATGAGAGTGAGGTTTTAACGCCAGCAGATGATTTGTTCCA
TATAAATAAAAAAGATTTTAAAGTTCCTTTTGTTTGTGGTGCAAGAAATTTGGGAGAAGCTTTAAGAAGAATAGGAGAAG
GAGCTTCTATGATAAGAACTAAAGGGGAAGCAGGTACAGGAAATGTAGTAGAAGCGGTAAGGCATATGAGAACTATAAGC
TCAGAAATGAGAAAACTGCAACTTACACCAAAAGAAGAGCTAATGACTGCAGCTAAAGAAATGGGAGCACCATTTAACTT
AGTAGAATATGTGGCAGAAAAGGGTAAACTTCCAGTAATAAATTTTGCAGCAGGTGGCATAGCAACACCAGCAGATGCAG
CTTTAATGATGCAGTTAGGGTGTGATGGAATATTTGTAGGTTCTGGAATATTTAAATCAGATAATCCAGAAAAAAGAGCA
AAAGCTATAGTTAAAGCAACAGCTCATTTTAAAGATCCAGAGGTTTTAGCTAAGGTTTCAGAGAACTTAGGAGGAGCAAT
GTCAGGTTTAGAAATCAGTAAGCTAGAAACAGAATTTGCTGAAAGAGGCTGGTAA

Protein sequence :
MEKNLAQMLKGGVIMDVVNPEQAKIAEEAGAVAVMALERVPSDIRKQGGVARTSDPKMIKEIINAVSIPVMAKVRIGHFV
EAQILEAIGVDCIDESEVLTPADDLFHINKKDFKVPFVCGARNLGEALRRIGEGASMIRTKGEAGTGNVVEAVRHMRTIS
SEMRKLQLTPKEELMTAAKEMGAPFNLVEYVAEKGKLPVINFAAGGIATPADAALMMQLGCDGIFVGSGIFKSDNPEKRA
KAIVKATAHFKDPEVLAKVSENLGGAMSGLEISKLETEFAERGW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 1e-81 67
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 1e-81 67
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 2e-81 67