Gene Information

Name : rplS (CLC_2292)
Accession : YP_001388136.1
Strain : Clostridium botulinum Hall
Genome accession: NC_009698
Putative virulence/resistance : Unknown
Product : 50S ribosomal protein L19
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0335
EC number : -
Position : 2422249 - 2422593 bp
Length : 345 bp
Strand : -
Note : this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site

DNA sequence :
ATGTTAGAAGTTATAAAAGCTATAGAAGCAGAACAAGTAAGAAGTGATTTACCAGAATTCAATGTAGGAGATACTGTAAA
AGTTCACCAAAAAATTAAAGAAGGAACTAGAGAAAGAGTTCAAGTATTTGAAGGAACAGTTTTAAAAAGACAAAATGGTG
GAGCAAGAGAAACTTTCACAGTAAGAAGAGTTGCTTACAATGTAGCAGTTGAAAAAACTTTCCCAGTTAATTCACCATTA
ATTGAAAAGATCCAAGTTGTAAGAAAAGGTAAAGTAAGAAGAGCTAAACTATACTACTTAAGAGATAGAGTAGGTAAAGC
AGCAAAAGTTAAAGAAAGAATATAA

Protein sequence :
MLEVIKAIEAEQVRSDLPEFNVGDTVKVHQKIKEGTRERVQVFEGTVLKRQNGGARETFTVRRVAYNVAVEKTFPVNSPL
IEKIQVVRKGKVRRAKLYYLRDRVGKAAKVKERI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rplS CAA68924.1 ribosomal protein L19 Not tested Internalin Protein 2e-29 58
rplS AAS66827.1 50S ribosomal subunit protein Not tested SSR-1 Protein 6e-24 48