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Name : CLC_1871 (CLC_1871) Accession : YP_001387726.1 Strain : Clostridium botulinum Hall Genome accession: NC_009698 Putative virulence/resistance : Resistance Product : DNA-binding response regulator Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG0745 EC number : - Position : 1979460 - 1980146 bp Length : 687 bp Strand : - Note : identified by match to protein family HMM PF00072; match to protein family HMM PF00486 DNA sequence : ATGCAGGAAAAAATATTAATAGTAGATGATGAAGATGATATAGTATCTTTTATAAAGGATTATTTTGAGGATCAAGGTTA CCGCGTTATTACAGCTAGTAATGGTAGAGAAGCTATAGAATACTGTGATAAAGATATAGATATTATTTTACTTGATATAA TGATGCCTAATATTGATGGTTTTCAGGTTTGCCAAAAGATAAGGGACAAAGTATCCTGTCCTATAATATTTTTAAGTGCT AGGCAAAGTGAGGTTGATAAAATTAAAGGTCTTTCAGTAGGTGGAGATGATTATATAGTAAAGCCCTTTAGCATAAAAGA ATTAAAAGCAAGAGTTGAGGCTCATCTTAGAAGAGAAAAAAGAGTTCCTTTAAATAATAGATCTAAGATAATCTTTGGAA AACTTACTTTAGATCTTAATAGTCGTAAAGTTCATTATGAAGAGGAGGAAATACTTTTTACAGCTAAAGAATTTGATATA GTAGAACTTTTAGCATTACATCCAGAACAGGTATTTTCTAAAGAACAAATCTATGAAAAAGTTTGGGGATATGATGCAGA AGGGGATGCAAATACAGTAGCAGAGCATATAAAAAAGATAAGAGCAAAGTTTATAAAAATAAGTGTATCTCTTAATCATA TAGCTACGGTATGGGGAGTAGGTTATAGATGGGAGAGAAAAAAATGA Protein sequence : MQEKILIVDDEDDIVSFIKDYFEDQGYRVITASNGREAIEYCDKDIDIILLDIMMPNIDGFQVCQKIRDKVSCPIIFLSA RQSEVDKIKGLSVGGDDYIVKPFSIKELKARVEAHLRREKRVPLNNRSKIIFGKLTLDLNSRKVHYEEEEILFTAKEFDI VELLALHPEQVFSKEQIYEKVWGYDAEGDANTVAEHIKKIRAKFIKISVSLNHIATVWGVGYRWERKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| nisR2 | YP_006309922.1 | NisR | Not tested | FWisland_1 | Protein | 1e-29 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| CLC_1871 | YP_001387726.1 | DNA-binding response regulator | AF155139.2.orf0.gene | Protein | 9e-34 | 43 |
| CLC_1871 | YP_001387726.1 | DNA-binding response regulator | NC_012469.1.7685629. | Protein | 2e-27 | 43 |
