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Name : pdp (CLC_1806) Accession : YP_001387661.1 Strain : Clostridium botulinum Hall Genome accession: NC_009698 Putative virulence/resistance : Unknown Product : pyrimidine-nucleoside phosphorylase Function : - COG functional category : F : Nucleotide transport and metabolism COG ID : COG0213 EC number : 2.4.2.2 Position : 1915243 - 1916547 bp Length : 1305 bp Strand : - Note : identified by match to protein family HMM PF00591; match to protein family HMM PF02885; match to protein family HMM PF07831; match to protein family HMM TIGR02644 DNA sequence : ATGAGAATGTATGATTTGATCCTAAAGAAAAGAAATGGAGGAGAGCTAAGCAAAGAAGAAATAGATTATTTTATTTTAGA ATATACTAATGGTAATGTCCCAGATTATCAAGCTTCAGCTCTTTTAATGGCTATATACTTTCAAAAAATGAAAAGAAGAG AAACTGTAGATTTGACTATGGCTATGGTTAACTCTGGAGATATATTGGATTTATCAAAAATACAGGGTATAAAAGTTGAT AAACATAGTACTGGTGGAGTTGGAGATACTACTACCTTAGTTTTGGCGCCTATGGTAGCAGCCTTAGGTATACCTGTAGC TAAAATGTCTGGTAGAGGTTTAGGTCATACTGGTGGAACTATAGATAAATTAGAATCTTTTAAAGGTTTTTCAGTAAATA TGACAGAGGATAAATTTATAAATAACGTTAACAATATTAAAATAGCTGTAGGAGCTCAAACAGCAGATTTAGCTCCAGCG GATAAAAAATTATATGCATTAAGAGATGTTACTGCTACAGTAGACAATATTTCTTTAATAGCTTCTAGTATAATGAGCAA AAAAATAGCTGCAGGAGCTAATGCCATAATTTTAGATGTAAAGGTTGGAGAAGGAGCCTTCATGAAAACTCCGGAAACTG CAAAAGAGTTAGCGGAAGAAATGGTTAATATAGGTAAAAGTGTAGGCAGAAATACTGTGGCTATATTATCAGATATGGAT CAACCTTTAGGTTATGCTATAGGAAATGCTTTAGAAGTAAAAGAAGCTATAGATACACTAAAAGGTAAAGGTCCTAAGGA TTTATTAGAATTATGTTTAACCTTAGGAAGTAATATGGTTATTTTATCACAAAAAGCAAATACTATAGAGGAAGCAAGAA AGATGCTTTTAAGTACTATAGAAAAAGGATTAGCTATAGAAAAATTAAAAGAATTTATTAGATCTCAAGGCGGAGATGGT ACTTTAGTAGACAATACAGAAAAATTACCTAAGGCAGAATATATAATTCCTGTAATTTGTGATAGAAATGGATATATAAA TAAAATTCATGCCCAAAATATAGGGATAATAGCATCAGAGTTAGGAGCAGGAAGGGTTACAAAGGATAGCATTATAGATT TAGCAGTAGGTATAGTTTTGAACAAGAAGAGATCAGATAAAGTTAAAAAAGGAGATATAATAGCTTATATTCATGCTAAT GATAAAATAAAAGGAGAAAAGGCTGCAAAAGATATATTAAATAATTATGTTATAGAAGAAGAGTTAAAAGAAGAATTACC TTTAATATATGGTACAGTAAAATAG Protein sequence : MRMYDLILKKRNGGELSKEEIDYFILEYTNGNVPDYQASALLMAIYFQKMKRRETVDLTMAMVNSGDILDLSKIQGIKVD KHSTGGVGDTTTLVLAPMVAALGIPVAKMSGRGLGHTGGTIDKLESFKGFSVNMTEDKFINNVNNIKIAVGAQTADLAPA DKKLYALRDVTATVDNISLIASSIMSKKIAAGANAIILDVKVGEGAFMKTPETAKELAEEMVNIGKSVGRNTVAILSDMD QPLGYAIGNALEVKEAIDTLKGKGPKDLLELCLTLGSNMVILSQKANTIEEARKMLLSTIEKGLAIEKLKEFIRSQGGDG TLVDNTEKLPKAEYIIPVICDRNGYINKIHAQNIGIIASELGAGRVTKDSIIDLAVGIVLNKKRSDKVKKGDIIAYIHAN DKIKGEKAAKDILNNYVIEEELKEELPLIYGTVK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| deoA | YP_005163381.1 | Thymidine phosphorylase | Not tested | Not named | Protein | 2e-74 | 45 |
