|
Name : CLC_1612 (CLC_1612) Accession : YP_001387471.1 Strain : Clostridium botulinum Hall Genome accession: NC_009698 Putative virulence/resistance : Virulence Product : antibiotic ABC transporter ATP-binding protein Function : - COG functional category : V : Defense mechanisms COG ID : COG1131 EC number : - Position : 1683586 - 1684293 bp Length : 708 bp Strand : + Note : identified by match to protein family HMM PF00005 DNA sequence : ATGGAAAAATATATTTTACAAACAAAAGATATTTGTAAAGTCTTTAAAGGTCAGCATGCAGTAAACAATATTTCAATTAC AGTGAGAGAGAATTCTGTGTATGGATTATTAGGGCCTAATGGGGCAGGAAAATCTACTATGTTAAAAATGTTAACAGGAA TGTTACGTCCCACATCCGGGAAAATTATATTTGACAATCATCATTGGACTAGAAAGGATTTAGTGAGTATTGGCGCTCTT ATTGAAGCTCCACCCCTTTATGAAAATTTAACTGCAAGGGAAAATTTAAAAGTTCGTACTACTCTTTTAGGATTAAAAGA CTCACGGATTGATGAAGTATTAAAAATTGTTGATTTAACCAATACAGGTAAAAAAACCGCTGGTAAGTTTTCAATGGGTA TGAAACAACGTTTAGGGATTGCCATTGCTCTAATTAATAATCCTAAACTATTGATATTAGATGAACCAACAAATGGTCTT GATCCTATTGGTATTCAAGAGTTACGTGAATTAATTCGATCATTTCCAAAGCAAGGAATAACAGTTATTTTATCTAGTCA TATTTTAGCGGAGGTTCAGCTTATTGCAGACCACATTGGAATTATAAGTAATGGAATCTTAGGATATGAAGCAAAAATTA ATCCTTCAGAGAATTTAGAAACACTTTTCACAGAAGTAGTAAAAAAGAATAAAAAAAGGAGGGCATAA Protein sequence : MEKYILQTKDICKVFKGQHAVNNISITVRENSVYGLLGPNGAGKSTMLKMLTGMLRPTSGKIIFDNHHWTRKDLVSIGAL IEAPPLYENLTARENLKVRTTLLGLKDSRIDEVLKIVDLTNTGKKTAGKFSMGMKQRLGIAIALINNPKLLILDEPTNGL DPIGIQELRELIRSFPKQGITVILSSHILAEVQLIADHIGIISNGILGYEAKINPSENLETLFTEVVKKNKKRRA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| epiF | YP_186701.1 | epidermin immunity protein F | Virulence | vSa¥â | Protein | 2e-44 | 52 |
| bsaF | NP_646577.1 | hypothetical protein | Not tested | vSa¥â | Protein | 2e-44 | 52 |
| epiF | YP_494453.1 | lantibiotic epidermin immunity protein F | Not tested | vSa¥â | Protein | 2e-44 | 52 |
| bsaF | YP_001332745.1 | lantibiotic immunity protein F | Not tested | vSa¥â | Protein | 2e-44 | 52 |
| sboF | YP_006309913.1 | SboF | Not tested | FWisland_1 | Protein | 4e-43 | 51 |
| cdd4 | CAA63569.1 | - | Not tested | PaLoc | Protein | 4e-44 | 50 |
| SPN23F_09830 | YP_002510959.1 | lantibiotic transport ATP-binding protein | Not tested | PPI-1 | Protein | 3e-32 | 44 |
| CD241_0087 | YP_005124356.1 | ABC transporter ATP-binding protein | Not tested | Not named | Protein | 7e-41 | 43 |
| DIP0090 | NP_938487.1 | ABC transporter ATP-binding protein | Not tested | Not named | Protein | 4e-41 | 43 |
| Spaf_1123 | YP_006309925.1 | putative transport ATP-binding protein | Not tested | FWisland_1 | Protein | 4e-30 | 41 |
