Gene Information

Name : rbsK (CLC_1595)
Accession : YP_001387455.1
Strain : Clostridium botulinum Hall
Genome accession: NC_009698
Putative virulence/resistance : Unknown
Product : ribokinase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0524
EC number : 2.7.1.15
Position : 1666245 - 1667156 bp
Length : 912 bp
Strand : +
Note : identified by match to protein family HMM PF00294; match to protein family HMM TIGR02152

DNA sequence :
ATGGATATTGCAGTTATTGGTTCAAATATGGTAGATTTGATAAGTTATATTGATAGAATGCCTAAAGAAGGTGAGACTTT
AGAAGCACTAGATTTTAAAATGGGATTTGGGGGTAAGGGAGCAAACCAGGCCGTTACAGCTGCAAGATTAAAATCAGATG
TTATGATGGTAAGTAAAGTTGGAGATGATTTATTTGGACAAAACACTATTAAAAATTTAAAAAACAATGGTGTAAATACA
GATTTTGTAACTGTTCAAAAAAATCAAGCTAGTGGAGTTGCACCTATTTTTGTTGATAGAGAATCTAAAAATAGCATTTT
AATTATTAAAGGTGCCAATAAAAATTTATCTCCTACAGATATAGATGATGCAAGTGAAGAATTGAAAAAGTGTTCTTTAA
TTATTTTACAATTGGAAATTGAATTAGAAACTGTTTATTATGCTATAGATTTTGCAAATAAAAATAATATTCCTGTATTG
TTAAATCCTGCTCCTGCTACAAAAGAGCTTGATTTCGATTATGTTTATAAATGTGATTTCTTTGTGCCAAATGAAACAGA
ATTAGAGATTTTAACAAATAAACCTGTAAATACAATAGGAAAGATAAAAGAAGCTGCTCATTTAATTGGGGATAAAGGTG
TTAAAAATGTAATTGTTACAATGGGTAGTAGAGGTTTACTATGGATTAATAAAGATGAAGAACATTTTATAAAAGCACGT
AAAGTTGATGCTGTGGATACCACTGGTGCTGGCGATGGATTTATTGGATGTTTTGCACATTATTATGTAGCCACAAAAAA
CATATTATTAGCTCTTGAAAAAGCAACAGCTTATGCAGCTCTTAGTGTTACAAGATATGGTACTCAAACTTCTTATCCTA
CAAAGGAGGAGTTTGAAAAATTTTTAAAATAA

Protein sequence :
MDIAVIGSNMVDLISYIDRMPKEGETLEALDFKMGFGGKGANQAVTAARLKSDVMMVSKVGDDLFGQNTIKNLKNNGVNT
DFVTVQKNQASGVAPIFVDRESKNSILIIKGANKNLSPTDIDDASEELKKCSLIILQLEIELETVYYAIDFANKNNIPVL
LNPAPATKELDFDYVYKCDFFVPNETELEILTNKPVNTIGKIKEAAHLIGDKGVKNVIVTMGSRGLLWINKDEEHFIKAR
KVDAVDTTGAGDGFIGCFAHYYVATKNILLALEKATAYAALSVTRYGTQTSYPTKEEFEKFLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
deoK ADD91722.1 deoxyribokinase DeoK Not tested PAI-I AL862 Protein 6e-80 64
unnamed CAE85173.1 hypothetical protein Not tested PAI V 536 Protein 8e-80 64
ORF4 AAK27331.1 unknown Not tested PAI-I AL862 Protein 1e-73 61