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Name : CLC_1102 (CLC_1102) Accession : YP_001386969.1 Strain : Clostridium botulinum Hall Genome accession: NC_009698 Putative virulence/resistance : Resistance Product : ABC transporter ATP-binding protein/permease Function : - COG functional category : V : Defense mechanisms COG ID : COG1132 EC number : - Position : 1124993 - 1126795 bp Length : 1803 bp Strand : + Note : identified by match to protein family HMM PF00005; match to protein family HMM PF00664 DNA sequence : ATGAACAAGAAAAAGAAAGGTATTCCAAGGCTATTGGAAATAGCTGGAGAAAAGCAAGGGCTACTTATTTGCTCATCCAT ATTTTCAGCTATCAGTGCAATTTTAATGTTATTACCATATATAGCGGTTTATTTTATAATAGCAGAGCTTTTAAAAAATG CTGCAAACCCTATAAATGTTAATTCTACACAAATGCTACACTGGGGTACTGCTGCTCTTGTAGGATTGGTAGGAGGAATT GTTTTCATGTATATATCGGGGTTAATGTCTCATACAGCAGCATACAGGATATTATATAGCTTAAGGGTTCGTATGTCAGA GCATATTGGTAAATTACCTCTAGGCTATTTAAGTAATACATCAACTGGTATAGTAAAGAAAACCTTTGAACAAAATGTAG AAAAGATTGAAGCCTTTGTTGCTCACCAGTTGCCAGATATGATAAATGTATTTGTGACAATGATTATTACAATAATTATG ATGTTAACTTTAAATCCATGGCTTACATTGGCTGCTATGGTACCACTTGTTTTGGGATTCTTAATACAGATGAAAAAAAG AAGTGGTAAGGCTGCAGAGGAAAGTGCAAACAAATACTATAATGCCTTAGAAAGAATCAACTCATCAACTATTCAATATG TAAAGGGAGTGCCTGCTGTAAAGATATTTGGTAGAAACGTATATTCTTTTCGCAAATTTTATGATGATATGATATCTTAC AGGGATTATTGTGTAAAGTATACAGATCAGTATCAAAATACCTATATAACTTCAAAGGTATTATTAAATTCAACTTTAAC ATTTATATTACCAGTGGGTATTCTTTTAATGGGAGGAAGATCAGGAGATCTTTCCTTTGCACAAACTCTTTTATTTTTTA TTATTTTAGCACCAGGAGTTGCGTCACCTATGTTGCGTTTTATGACTTTTGCATCTTCATTAGGAGATATTTCTGAGGGA GTTCAGCGTATTGATAAGATCTTTGCTGAGAAAACTATTTGTGAGGCAAATAATCCTAGGATACCTTCCTCTTATGATAT TGAGTTTGATAATGTGTCCTTTTCTTATGAGTCTGAGGACACATCCACTAGGAAAGAAGCATTATCAAAAGTAAGTTTTA AGGCGAAAAAAGGTTCATGTACAGCACTTGTAGGACCTTCAGGTTCTGGAAAATCTACAGTGGCTAACCTTATTCCACGT TTTTGGGATATTCAAAAAGGTCATATTAGAATCGGTGGGATAGATATTAAAGAAATTTCTACAGAGAATTTGATGGATTT AGTTTCCTTTGTTTTTCAAGATACATTTTTATTTCATGATACCTTATATGAAAATATCCGTGTAGGCAGATCAGATGCCA CAAAGGAAGAAATATTTAAGGCTGCAAAAGCTGCTCAGTGTCATGAGTTTATTACAGGACTTGAAAAAGGTTATGACACT ATCGTTGGTGAAGGAGGCACTCATCTTTCAGGTGGTGAAGAACAAAGAGTATGTGTGGCAAGAGCAATTTTAAAAAATTC TCCTATACTAGTTCTAGATGAAGCTACTGCTTTTTCAGATTCAGAAAATGAGTATCATATGCAGCTGGCTCTAAGAGAGC TTATGAAGAATAAAACTGTTATTATGATTGCACATAGGCTAACAACTATTAAAGATGCTGAAAATATAGTGGTTATGAAA GATGGAACTATTGTAGAGGCGGATACTCATGATGTACTTATAAATAAAGATGGATTGTATAAAAAGCTTTGGAACTCATA TACAGTGGCCTCTAATTGGGGTATAAGTAAAGGAGGGATTTAG Protein sequence : MNKKKKGIPRLLEIAGEKQGLLICSSIFSAISAILMLLPYIAVYFIIAELLKNAANPINVNSTQMLHWGTAALVGLVGGI VFMYISGLMSHTAAYRILYSLRVRMSEHIGKLPLGYLSNTSTGIVKKTFEQNVEKIEAFVAHQLPDMINVFVTMIITIIM MLTLNPWLTLAAMVPLVLGFLIQMKKRSGKAAEESANKYYNALERINSSTIQYVKGVPAVKIFGRNVYSFRKFYDDMISY RDYCVKYTDQYQNTYITSKVLLNSTLTFILPVGILLMGGRSGDLSFAQTLLFFIILAPGVASPMLRFMTFASSLGDISEG VQRIDKIFAEKTICEANNPRIPSSYDIEFDNVSFSYESEDTSTRKEALSKVSFKAKKGSCTALVGPSGSGKSTVANLIPR FWDIQKGHIRIGGIDIKEISTENLMDLVSFVFQDTFLFHDTLYENIRVGRSDATKEEIFKAAKAAQCHEFITGLEKGYDT IVGEGGTHLSGGEEQRVCVARAILKNSPILVLDEATAFSDSENEYHMQLALRELMKNKTVIMIAHRLTTIKDAENIVVMK DGTIVEADTHDVLINKDGLYKKLWNSYTVASNWGISKGGI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| smi_1698 | YP_003446800.1 | multidrug ABC transporter ATPase/permease | Not tested | The aminoglycoside resistance gene cluster | Protein | 1e-111 | 42 |
