Gene Information

Name : CLB_3138 (CLB_3138)
Accession : YP_001385431.1
Strain : Clostridium botulinum ATCC 19397
Genome accession: NC_009697
Putative virulence/resistance : Virulence
Product : exopolysaccharide biosynthesis protein
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1086
EC number : -
Position : 3271590 - 3273455 bp
Length : 1866 bp
Strand : -
Note : identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993

DNA sequence :
ATGAGAAAAGATAGAGAATTGATTCTTTATGATATATTATTAATAATTTTATCATTATATTTAGCAATTTTATTAAGATT
CGATTTCGGTATGGCTTCTATGGCTTCGGAATTTAAAAAATATATGATATTTTTTAAGTTATCAGTAATTCCAGTTATAA
TAATAATCTTATTTTTTAATAAAATATTTAATTTATATAGTAGTATATGGAAATATGCTTCAGTAGAAGAACTTATGTCT
ATAATTTATTCAGTTTCTATATCTAATATTATATTCATAATTTATAGTTATTTTATTAATTATAAAGTTCTAGAAAGTAA
TTATTATAGATTCCCATTTACTGTACATATAATATTTTGGATTCTATCTATAGTATCCCTAGGAGGTACAAGATTTATAT
ATAGAGTTATAGAAGATAAGGAATGTAATAAGAACAAATGTAACTGTGATTCTAAAGAAAAGAAGTTACTTATAATAGGG
GCAGGGGATGCAGCAGCTCTCATTATAAAAGAAATAAAAAGAAATAAGGAATTAAATTATAGTATAATAGGTCTTGTAGA
TGATGATATAGAGAAGTTAGGAAAGAGAATAAATGGTATACCTGTTTTAGGGGGAAGAGAAAGTATTATAAAGATATCTA
AAAATAAAAAAATAGATGAAATAATATTAGCTATACCTTCAGCAGCATCTTCAACAAAAAGTGAAATAGTATCTATATGT
AAAGAAACTAGTTGTAAATTAAAAACTTTACCAAGCATGGATAAGGTAATACAGGGTAAATTTAATATGAGCAAGTTAAG
AGATGTAAGTATTGAGGATTTGCTTGGGAGAGAGGAAGTTAAACTAGATGATAGTGGAATAAATAGATATATAAAGGATA
AAGTAGTTTTAGTTACTGGTGGAGGAGGGTCTATAGGTTCAGAACTTTGTAGACAAATAGTTAAATTTTCACCTAAAAAA
CTTTTAATATTAGATATATATGAAAACAATGCATATGATGTCCAAATGGAACTAAATTATAAATATCCAGAACTGGACAA
AGCTGTTATAATAGCTTCTATAAGGGATGAAAAGAGGCTAAGAAATATATTTTCATTATATAAACCAGATGTAGTTTTTC
ATGCAGCAGCCCATAAGCATGTTCCACTAATGGAAGAGAATCCAGCAGAATCTATTAAAAATAACGTAATAGGTACCTAT
AATCTAATAAAATGTGCCCATGAATTTGGGATTGAGCGTTTTGTACAAATAAGTACAGATAAAGCTGTTAATCCAACTAA
TATAATGGGAGCTACAAAAAGATTTTGTGAAATAATGATTCAAGCTTTTGATAAAATAAGTAAAACTGAATTTGTAGCTG
TTAGATTTGGGAATGTTTTAGGAAGTAATGGATCTGTTATTCCATTATTTAAAAAACAAATATCTCATGGAGGACCTGTC
ACTGTAACTCATCCAGAAATAAATAGATATTTTATGACTATACCAGAAGCAGCTCAATTAGTTATACAAGCAGGAGCTAT
GGCAAAAGGTGGAGAAATATTTGTTCTGGATATGGGAAAACCAGTTAAAATTGTAGATTTAGCTAAAGATTTAATAACTT
TATCTGGATATAAGCCAGAGGAAGATATTAAGATTGAATACACAGGATTAAGACCTGGGGAAAAATTATATGAAGAACTA
TTAATGGATGAAATAGCTTTAACATCAACAGGACATAATAAAATATTTGTAGAAAAACCTATGGAAAATAATATAGACTT
TGTAGAAAAATCCATAGAAGAATTTAAAAAAGTTGTTTATAATGATGAAGAAGAAATATTTGCATTGATAGAAAAGAAGG
TTCCAACATATATAAGAAAAAAATAA

Protein sequence :
MRKDRELILYDILLIILSLYLAILLRFDFGMASMASEFKKYMIFFKLSVIPVIIIILFFNKIFNLYSSIWKYASVEELMS
IIYSVSISNIIFIIYSYFINYKVLESNYYRFPFTVHIIFWILSIVSLGGTRFIYRVIEDKECNKNKCNCDSKEKKLLIIG
AGDAAALIIKEIKRNKELNYSIIGLVDDDIEKLGKRINGIPVLGGRESIIKISKNKKIDEIILAIPSAASSTKSEIVSIC
KETSCKLKTLPSMDKVIQGKFNMSKLRDVSIEDLLGREEVKLDDSGINRYIKDKVVLVTGGGGSIGSELCRQIVKFSPKK
LLILDIYENNAYDVQMELNYKYPELDKAVIIASIRDEKRLRNIFSLYKPDVVFHAAAHKHVPLMEENPAESIKNNVIGTY
NLIKCAHEFGIERFVQISTDKAVNPTNIMGATKRFCEIMIQAFDKISKTEFVAVRFGNVLGSNGSVIPLFKKQISHGGPV
TVTHPEINRYFMTIPEAAQLVIQAGAMAKGGEIFVLDMGKPVKIVDLAKDLITLSGYKPEEDIKIEYTGLRPGEKLYEEL
LMDEIALTSTGHNKIFVEKPMENNIDFVEKSIEEFKKVVYNDEEEIFALIEKKVPTYIRKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0063 YP_300153.1 capsular polysaccharide biosynthesis protein Not tested SCC15305cap Protein 3e-90 47
cap1D AAA64643.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 2e-90 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CLB_3138 YP_001385431.1 exopolysaccharide biosynthesis protein VFG1300 Protein 6e-87 44