Gene Information

Name : CLB_1864 (CLB_1864)
Accession : YP_001384185.1
Strain : Clostridium botulinum ATCC 19397
Genome accession: NC_009697
Putative virulence/resistance : Resistance
Product : DNA-binding response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1979243 - 1979929 bp
Length : 687 bp
Strand : -
Note : identified by match to protein family HMM PF00072; match to protein family HMM PF00486

DNA sequence : 
ATGCAGGAAAAAATATTAATAGTAGATGATGAAGATGATATAGTATCTTTTATAAAGGATTATTTTGAGGATCAAGGTTA
CCGCGTTATTACAGCTAGTAATGGTAGAGAAGCTATAGAATACTGTGATAAAGATATAGATATTATTTTACTTGATATAA
TGATGCCTAATATTGATGGTTTTCAGGTTTGCCAAAAGATAAGGGACAAAGTATCCTGTCCTATAATATTTTTAAGTGCT
AGGCAAAGTGAGGTTGATAAAATTAAAGGTCTTTCAGTAGGTGGAGATGATTATATAGTAAAGCCCTTTAGCATAAAAGA
ATTAAAAGCAAGAGTTGAGGCTCATCTTAGAAGAGAAAAAAGAGTTCCTTTAAATAATAGATCTAAGATAATCTTTGGAA
AACTTACTTTAGATCTTAATAGTCGTAAAGTTCATTATGAAGAGGAGGAAATACTTTTTACAGCTAAAGAATTTGATATA
GTAGAACTTTTAGCATTACATCCAGAACAGGTATTTTCTAAAGAACAAATCTATGAAAAAGTTTGGGGATATGATGCAGA
AGGGGATGCAAATACAGTAGCAGAGCATATAAAAAAGATAAGAGCAAAGTTTATAAAAATAAGTGTATCTCTTAATCATA
TAGCTACGGTATGGGGAGTAGGTTATAGATGGGAGAGAAAAAAATGA

Protein sequence : 
MQEKILIVDDEDDIVSFIKDYFEDQGYRVITASNGREAIEYCDKDIDIILLDIMMPNIDGFQVCQKIRDKVSCPIIFLSA
RQSEVDKIKGLSVGGDDYIVKPFSIKELKARVEAHLRREKRVPLNNRSKIIFGKLTLDLNSRKVHYEEEEILFTAKEFDI
VELLALHPEQVFSKEQIYEKVWGYDAEGDANTVAEHIKKIRAKFIKISVSLNHIATVWGVGYRWERKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
nisR2 YP_006309922.1 NisR Not tested FWisland_1 Protein 1e-29 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CLB_1864 YP_001384185.1 DNA-binding response regulator AF155139.2.orf0.gene Protein 9e-34 43
CLB_1864 YP_001384185.1 DNA-binding response regulator NC_012469.1.7685629. Protein 2e-27 43