Gene Information

Name : CLB_1605 (CLB_1605)
Accession : YP_001383928.1
Strain : Clostridium botulinum ATCC 19397
Genome accession: NC_009697
Putative virulence/resistance : Resistance
Product : antibiotic transporter response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1685405 - 1686064 bp
Length : 660 bp
Strand : +
Note : identified by match to protein family HMM PF00072; match to protein family HMM PF00486

DNA sequence :
ATGTCGAAAATACTTGTAATTGATGATGAAGAAGATATTTTAGCCCTTGTTAAAAATGTTCTTTCCAAGGATAATCACTT
AGTAACTACAGTAAAGGAAGCAAAAGATATTCCGTTAAATGATTTTGTAAAATTTGATCTGATTTTACTAGATGTAATGA
TGCCTGATATTGATGGCTTCACTTTGTGTAAGGAAATTAGAGAGATGGTAGACTGTCCAATTCTTTTTTTAACAGCAAAA
ACTATGGAAAGTGACATTATGTTTGGATTAGGAATTGGTGGAGATGATTATATAACGAAACCTTTTGGAGTAGGAGAACT
AAGAGCTAGAGTAAATGCTCATCTACGCAGGGAACATCGTGAAAAACGTCATATTTTTGTAGCTTCAGATATTATATTTA
ATCTATCCAGTAAGGAAATTAAAATAGGCGATGTAAAGGTGGCCTTCACAAAGGGAGAATATGCTATATGTGAATACCTT
GCAAGAAATTCAGGACAGGTGTTTTCTAAAGAACAAATATATGAAGCGGTTTATGGGTATGATGGAGAAAGTGATAGCTC
TGCTATTACAGAGCATATTAAAAATATTAGAGCTAAGTTAAAAGTTTTTGATATATCACCAATAGAAACAGTATGGGGGA
TTGGTTACAAATGGGTATAA

Protein sequence :
MSKILVIDDEEDILALVKNVLSKDNHLVTTVKEAKDIPLNDFVKFDLILLDVMMPDIDGFTLCKEIREMVDCPILFLTAK
TMESDIMFGLGIGGDDYITKPFGVGELRARVNAHLRREHREKRHIFVASDIIFNLSSKEIKIGDVKVAFTKGEYAICEYL
ARNSGQVFSKEQIYEAVYGYDGESDSSAITEHIKNIRAKLKVFDISPIETVWGIGYKWV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSU98_0912 YP_001200470.1 NisR Not tested 89K Protein 5e-26 48
SSU05_0907 YP_001198273.1 NisR Not tested 89K Protein 2e-40 47
nisR2 YP_006309922.1 NisR Not tested FWisland_1 Protein 2e-39 44
nisR YP_006309898.1 NisR Not tested FWisland_1 Protein 6e-44 43