Gene Information

Name : CLB_1602 (CLB_1602)
Accession : YP_001383925.1
Strain : Clostridium botulinum ATCC 19397
Genome accession: NC_009697
Putative virulence/resistance : Virulence
Product : antibiotic ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1131
EC number : -
Position : 1683101 - 1683808 bp
Length : 708 bp
Strand : +
Note : identified by match to protein family HMM PF00005

DNA sequence :
ATGGAAAAATATATTTTACAAACAAAAGATATTTGTAAAGTCTTTAAAGGTCAGCATGCAGTAAACAATATTTCAATTAC
AGTGAGAGAGAATTCTGTGTATGGATTATTAGGGCCTAATGGGGCAGGAAAATCTACTATGTTAAAAATGTTAACAGGAA
TGTTACGTCCCACATCCGGGAAAATTATATTTGACAATCATCATTGGACTAGAAAGGATTTAGTGAGTATTGGCGCTCTT
ATTGAAGCTCCACCCCTTTATGAAAATTTAACTGCAAGGGAAAATTTAAAAGTTCGTACTACTCTTTTAGGATTAAAAGA
CTCACGGATTGATGAAGTATTAAAAATTGTTGATTTAACCAATACAGGTAAAAAAACCGCTGGTAAGTTTTCAATGGGTA
TGAAACAACGTTTAGGGATTGCCATTGCTCTAATTAATAATCCTAAACTATTGATATTAGATGAACCAACAAATGGTCTT
GATCCTATTGGTATTCAAGAGTTACGTGAATTAATTCGATCATTTCCAAAGCAAGGAATAACAGTTATTTTATCTAGTCA
TATTTTAGCGGAGGTTCAGCTTATTGCAGACCACATTGGAATTATAAGTAATGGAATCTTAGGATATGAAGCAAAAATTA
ATCCTTCAGAGAATTTAGAAACACTTTTCACAGAAGTAGTAAAAAAGAATAAAAAAAGGAGGGCATAA

Protein sequence :
MEKYILQTKDICKVFKGQHAVNNISITVRENSVYGLLGPNGAGKSTMLKMLTGMLRPTSGKIIFDNHHWTRKDLVSIGAL
IEAPPLYENLTARENLKVRTTLLGLKDSRIDEVLKIVDLTNTGKKTAGKFSMGMKQRLGIAIALINNPKLLILDEPTNGL
DPIGIQELRELIRSFPKQGITVILSSHILAEVQLIADHIGIISNGILGYEAKINPSENLETLFTEVVKKNKKRRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
epiF YP_186701.1 epidermin immunity protein F Virulence vSa¥â Protein 2e-44 52
bsaF NP_646577.1 hypothetical protein Not tested vSa¥â Protein 2e-44 52
epiF YP_494453.1 lantibiotic epidermin immunity protein F Not tested vSa¥â Protein 2e-44 52
bsaF YP_001332745.1 lantibiotic immunity protein F Not tested vSa¥â Protein 2e-44 52
sboF YP_006309913.1 SboF Not tested FWisland_1 Protein 4e-43 51
cdd4 CAA63569.1 - Not tested PaLoc Protein 4e-44 50
SPN23F_09830 YP_002510959.1 lantibiotic transport ATP-binding protein Not tested PPI-1 Protein 3e-32 44
CD241_0087 YP_005124356.1 ABC transporter ATP-binding protein Not tested Not named Protein 7e-41 43
DIP0090 NP_938487.1 ABC transporter ATP-binding protein Not tested Not named Protein 4e-41 43
Spaf_1123 YP_006309925.1 putative transport ATP-binding protein Not tested FWisland_1 Protein 4e-30 41