Gene Information

Name : Anae109_0745 (Anae109_0745)
Accession : YP_001377942.1
Strain : Anaeromyxobacter sp. Fw109-5
Genome accession: NC_009675
Putative virulence/resistance : Virulence
Product : type III secretion system protein
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG4790
EC number : -
Position : 848481 - 849152 bp
Length : 672 bp
Strand : -
Note : part of a set of proteins involved in the infection of eukaryotic cells; in plant pathogens involved in the hypersensitivity response

DNA sequence :

GTGATCCCGCTCGCGCTCGCGGCGGGCCCCGTCGCGGACCGGCCCGCGGAGCTGCTCGTCGTCCTCGCGGCGCTGGCGGT
CGTCCCGGCGGCGCTGGTGATGCTGACCTCGTTCCTCAAGATCGTGGTCGTGCTCTCGATCGCGCGCTCGGCGCTCGGAG
CGCCGCAGGTCCCGCCGAACACGGCGGTGACCGGGCTCGCCCTCGTCCTCACCGCGCTCGTCATGGCGCCCGTCGGAGAG
CGCGCGGTGGCGGCCATGCGCGCCGCCCCGGCCGGTCACGGCGTCGCCGGCACGCTCGCGCAGCTCGAGCGCGGCTCCGA
TCCCCTCCGCGGCTTCCTCCTGCGGTTCGCGCGCGCGGACGACCGCGCCGCCTTCGTCGACGTCGCGCGGCGGCTGCGCG
GACCCGACGCCGCTCCTCCCGCCGAGCGGGACCTCGCCGTCCTCGCGCCCGCGTTCGTGGTGTCGGAGCTGCGGCGCGCG
TTCACCATCGGGTTCCTCGTGTTCGTCCCGTTCCTGGTCGTCGATCTCGTCGTCTCGAACGTGCTCCTCGCGCTCGGGCT
CACCCAGCTCTCGCCGACCTCGATCGCCCTCCCCTTCAAGCTCCTCCTCTTCGTCGCGGTCGACGGGTGGAAGCTCCTCG
CCCGCGCGCTCGCGCTCTCGTACGCCGGGTGA

Protein sequence :

MIPLALAAGPVADRPAELLVVLAALAVVPAALVMLTSFLKIVVVLSIARSALGAPQVPPNTAVTGLALVLTALVMAPVGE
RAVAAMRAAPAGHGVAGTLAQLERGSDPLRGFLLRFARADDRAAFVDVARRLRGPDAAPPAERDLAVLAPAFVVSELRRA
FTIGFLVFVPFLVVDLVVSNVLLALGLTQLSPTSIALPFKLLLFVAVDGWKLLARALALSYAG

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
hrcR	AAP34349.1	HrcR	Virulence	Hrp PAI	Protein	2e-13	48
XC_3016	YP_244084.1	type III secretion system protein	Virulence	Hrp PAI	Protein	5e-13	48
hrcR	NP_636600.1	type III secretion system protein	Virulence	Hrp PAI	Protein	5e-13	48
hrcR	AAD21321.1	HrcR	Virulence	Hrp PAI	Protein	2e-13	48
hrcR	NP_640757.1	type III secretion system protein	Virulence	Hrp PAI	Protein	3e-13	48
hrcR	YP_362153.1	type III secretion system protein	Virulence	Hrp PAI	Protein	3e-13	48
hrcR	BAB07862.1	HrcR	Virulence	Hrp PAI	Protein	2e-13	47
hrcR	YP_198720.1	type III secretion system protein	Virulence	Hrp PAI	Protein	3e-13	47
lscR	AAO18040.1	LscR	Virulence	TTSS locus	Protein	2e-11	46
hrcR	AAT96146.1	HrcR	Virulence	T-PAI	Protein	0.27	46
hrcR	AAT96200.1	HrcR	Virulence	T-PAI	Protein	0.23	46
hrcR	NP_791222.3	type III secretion protein HrcR	Virulence	Hrp PAI	Protein	0.039	45
hrcR	AAG33884.1	HrcR	Virulence	Hrp PAI	Protein	0.027	45
hrcR	ABQ88359.1	HrcR	Virulence	Hrp PAI	Protein	0.79	44
hrpW	AAB05075.1	HrpW	Virulence	Hrp PAI	Protein	0.79	44
hrcR	AAT96262.1	HrcR	Virulence	S-PAI	Protein	5e-08	43
hrcR	AAT96303.1	HrcR	Virulence	S-PAI	Protein	5e-08	43
hrcR	AAT96343.1	HrcR	Virulence	S-PAI	Protein	5e-08	43
hrcR	ABA47279.1	HrcR	Virulence	S-PAI	Protein	1e-07	42
escR	AFO66317.1	putative LEE-encoded type III secretion system factor	Virulence	SESS LEE	Protein	7e-08	42
escR	AFO66400.1	putative LEE-encoded type III secretion system factor	Virulence	SESS LEE	Protein	7e-08	42
hrcR	AAB06005.2	HrcR	Virulence	Hrp PAI	Protein	2e-08	41

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
Anae109_0745	YP_001377942.1	type III secretion system protein	VFG0044	Protein	7e-13	50
Anae109_0745	YP_001377942.1	type III secretion system protein	VFG0394	Protein	2e-11	47
Anae109_0745	YP_001377942.1	type III secretion system protein	VFG2338	Protein	1e-11	47
Anae109_0745	YP_001377942.1	type III secretion system protein	VFG0188	Protein	2e-12	45
Anae109_0745	YP_001377942.1	type III secretion system protein	VFG2494	Protein	3e-11	42