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Name : Anae109_3725 (Anae109_3725) Accession : YP_001380888.1 Strain : Anaeromyxobacter sp. Fw109-5 Genome accession: NC_009675 Putative virulence/resistance : Unknown Product : sigma-54 dependent trancsriptional regulator Function : - COG functional category : K : Transcription COG ID : COG3829 EC number : - Position : 4340425 - 4342380 bp Length : 1956 bp Strand : + Note : TIGRFAM: PAS sensor protein; propionate catabolism operon regulatory protein PrpR; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; Propionate catabolism activator domain protein; PAS fold domain protein; SMART: PAS DNA sequence : GTGAGCCCCGCGGACGCTGCCGAGGCGCCCGTGCCCTTTCGCAGCGACGAGAAGCCGGTCATCTGGGCGTTCAGCTCGAG CCGGCTGCGCCAGGTGCTCGAGAGCGCCGCCCCCATCTACGCGGACCGCGCCGAGGTGCGCGTCTTCGACCTGAGCTTCG AGGGCGCGCTCGAGACGGCGCAGAGCCTCACCGAGGCGGACGAGCGGGTGGACGCGTTCGTCGCCGCCGGCTCCAACGGC GCGTACCTGCGCGACCACGGGCCCGTCCCCGTGGCGCTGGTGGACGTCTCGACCACCGACGCGCTCCAGGCGCTCGCGCA CGCGCGCACCCTCGGGCGCCGCGTCGGCGTGGTGAACTTCCGCCGCGTGCTGCCCGGCCTCGAGCGCTGGAAGGACCTCC TGCGCGGCGTCCAGATCGAGCAGCGCGCCTACGTCACCCCCGAGGAGGCCCGGGCCGCCGTGGCGGAGCTCGCGGCCCAC GGCTTCGAGGTGGTGGTGGGCCCCGGCCCCGCCTGCGACGAGGCCGAGCGCGCCGGCCTGAAGTCGGTGCTCCTCTACTC GCTGGAGTGCGTCTGCGCGACCATCGAGCGGGCCATCGAGATGGCGCAGGTCGCGCGGGCGGAGCGGGGGCGGCGCGAGC AGCTCGCGGGCGTCATCGCCCACATCGACGAGGCCGTCGTCGCGGTGGACGCGGCCGAGCGGATCGCGGTGGTGAACCCC GGCTTCGAGCGGCTGCTCGGCGCGCGCGGGGTGGAGCTCGTGGGCAAGCGCCTCTCGAGCGTCGCACCCGAGCTGTCCCT GGCCCGGGTCCTCGAGACGGGCGCGCCCGAGCTGCGGTCGTTCCAGAAGCTCGGCGGGCGCAGCCTCGTCGTGAGCCGCA TCCCCGTGCGCCAGCGCGGTGTCCTCTCCGGCGCGGTGCTCACCTGCCAGGACTCGAGGACGCTCCTGCGCGTGGACCGT GACCTCCGCTCCGAGCTCCGGCCGCGCCGCTTCATCGCCCGCTACGAGCTCGCGGGGATCGTGGGCACGTCGGAGGCCAT CCGGACGGTGCGGACCCTCGCCGAGCAGTACGCCGGGACCGAGGGGACCGTCCTCATCACGGGCGAGAGCGGCACCGGCA AGGAGATGATCGCGCAGGGCGTCCACAACGCCGGGCGGCGCCGCGACCGGCCCTTCGTCGCCATCAACTGCGCCGCCTTC CCCGAGGCGCTGCTCGAGTCGGAGCTGTTCGGCTACGAGGAGGGCGCCTTCACCGGCTCGCGCCGCGGCGGGCGGGCCGG GCTCTTCGAGGCCGCCCACACCGGCACGATCTTCCTCGACGAGGTCGGAGACGTCCCCATCACGCTTCAGACCCGCCTCC TGCGCGTGCTGCAGGAGCGCCAGGTGCTGCGGCTCGGCAGCAACGACCCGACCCCGATCGACGTCCGGGTGGTCGCCGCG ACGAACCGCGATCTCAAGCGCGAGATCGCGCGCGGCGCCTTCCGCGAGGATCTCTACTACCGGCTCAACATCCTCCCCAT CCACCTGCCGCCGCTGCGGGCGCGGCGAGACGACGTGGCGCCCATCGCCGAGGCGCTCCTGCGCGACGCGCTCGCGCGCC ACGGCGTGCCGGACGCGCTCCCGCGGGCGCTCGCCCTGCTCCTCCCCTGGCTCCAGGGCTACGCCTGGCCGGGGAACGTC CGCGAGCTCGAGAACGTGCTGGAGCGCATCGCGGTCCTCTACTCGCACCGGGCCCCGGACCAGGTCGGATCGGAGGCCTT GCGCGCCGTGCTCCCGGAGCTGTTCCAGGTCGCGGACGAGCCGCGAGACGGCGATCTCCGCAGCGCCCGCGAGGCCCAGG AGGCGGCGGTGATCCGGCGCGTGGTCGAGGAGTGCGGCGGCAACATGAAGGCGGCCGCCAAGCGGCTGGGCGTGGGACGC TCCACGCTTTACCGCAAGCTGAGAACGGCGGGGTGA Protein sequence : MSPADAAEAPVPFRSDEKPVIWAFSSSRLRQVLESAAPIYADRAEVRVFDLSFEGALETAQSLTEADERVDAFVAAGSNG AYLRDHGPVPVALVDVSTTDALQALAHARTLGRRVGVVNFRRVLPGLERWKDLLRGVQIEQRAYVTPEEARAAVAELAAH GFEVVVGPGPACDEAERAGLKSVLLYSLECVCATIERAIEMAQVARAERGRREQLAGVIAHIDEAVVAVDAAERIAVVNP GFERLLGARGVELVGKRLSSVAPELSLARVLETGAPELRSFQKLGGRSLVVSRIPVRQRGVLSGAVLTCQDSRTLLRVDR DLRSELRPRRFIARYELAGIVGTSEAIRTVRTLAEQYAGTEGTVLITGESGTGKEMIAQGVHNAGRRRDRPFVAINCAAF PEALLESELFGYEEGAFTGSRRGGRAGLFEAAHTGTIFLDEVGDVPITLQTRLLRVLQERQVLRLGSNDPTPIDVRVVAA TNRDLKREIARGAFREDLYYRLNILPIHLPPLRARRDDVAPIAEALLRDALARHGVPDALPRALALLLPWLQGYAWPGNV RELENVLERIAVLYSHRAPDQVGSEALRAVLPELFQVADEPRDGDLRSAREAQEAAVIRRVVEECGGNMKAAAKRLGVGR STLYRKLRTAG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAK01495.1 | propionate catabolism operon regulator prpR | Not tested | PAGI-1 | Protein | 4e-88 | 44 |
