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Name : Anae109_2878 (Anae109_2878) Accession : YP_001380062.1 Strain : Anaeromyxobacter sp. Fw109-5 Genome accession: NC_009675 Putative virulence/resistance : Unknown Product : sigma-54 dependent trancsriptional regulator Function : - COG functional category : K : Transcription COG ID : COG3829 EC number : - Position : 3326944 - 3328890 bp Length : 1947 bp Strand : + Note : TIGRFAM: PAS sensor protein; propionate catabolism operon regulatory protein PrpR; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; Propionate catabolism activator domain protein; PAS fold-4 domain protein; PAS fold DNA sequence : ATGGCCATCGACGCGGACCGCCGCCCGATCGTGTGGGCCTTCAGCACGAGCCGGCTGCGGCACGTCTTCGAGAGCGTCGC GCCGCTCCTCGCCGACGTCGCCGAGGTGCGGGTCTTCGACAAGGGCTTCGAGGAGGCGCTCCAGGTGTCGCGCGCGCTCG TCGAGGCCGGCGAGGAGGTGGACGCGTTCGTCGCCGCCGGCTCGAACGGCGCGTACCTGCGCGATCACGCGAGCGTCCCG GTGGTGGTGGTGATGGCCTCCACCCTGGACGCGCTCCAGGCGCTGGTCCAGGCGCGCAAGCTGTCGAACCGGATCGCGGT GGTGAACTTCCGGCGGGTGGTCGCGGGGCTCGAGCAGGGCATCGGGCTCATGGAGGACACCACCATCGTGCAGCGACCGT ACGTGACGCCGGAGGACGCGAAGGCCCACGTGGCCGACCTCGCCGCCCAGGGGTTCGGGGTCGTCGTCGGTCCCGGCCCG GTGTGCGACCTCGCGGAGCGCGCGGGCCTCCCGTCGGTGCTCCTGTACGGGCAGGACTCCCTCTCGGAGGCGATCCGCCA CGCCGCGGAGGTGGCGCACATCGCGCGCGCGGCCGAGGCGAAGCGGCTGGACGTCGAGCGCGTCCTCCGCCACCTGGACG TGGGGGTGGTCGCGGTGGACGGCGAGGAGCGGATCCAGACGGTGAACCCCGCGCTGCAACGGCTGCTCGGCGTCACCGCC CCGGAGCTCACCGGACGCCGCCTGTCCGCGGTCGCCCCCGAGCTCTCCCTCGCGCGGGTGCTCGAGACGGGCACGCCCGA GCTCGACGTGGTGCAGCGGCTCGGCAGCCGGACGCTGGTGGTCAGCCGGGTGCCGCTGCGCGAGGGGGGAGCGCAGCGCG GCGCCCTGCTCACCTGCCAGGACGCCGCGGTCATCCAGCGGCTCGAGCGCGGGCTCCGCACCGAGCACCGCCCTCCCCGC TTCGTCGCCCGGTTCGACCTCGGCGGCCTCGTCGGCGCGTCCCCGGCGATCGCCGGCGTGCGCGCGCTCGCCGAGCGGTA CGCGCGCACCGACGCGACCGTGCTCATCACCGGCGAGAGCGGGACCGGCAAGGAGATGGTGGCGCAGGGCATCCACCGCG CGAGCCGCCGGCGCGACCGGCCGTTCGTGGCGGTGAACTGCGCGGCGTTCCCGGAGACGCTCCTCGAGGCCGAGCTGTTC GGCCACGAGGAGGGCGCCTTCACCGGCGCGAGGCGCGGCGGGCGCCCCGGCCTCTTCGAGGCGGCGCACACCGGCACCCT GTTCCTCGACGAGATCGGGGACGTCCCGACCACCCTCCAGACCCGGCTCCTTCGCGTGCTGCAGGAGCGGCAGGTGCTGC GCCTCGGCAGCAACCACCCCACCCCCGTGGACGTCCGCGTGGTGGCCGCCACGCACCGCGACCTGAGGGCGGCCACCGCG CGCGGCGAGTTCCGCGAGGACCTGTTCTACCGGCTGAACATCCTGCCGCTGCACGTCCCTCCGCTCCGCGAGCGCGGCGA GGACGTCCAGGCCATCGCCGCCGAGCTCCTGAAGCGCGCGCTCCTCCGCCACGGGGAGCCGGACGCGCACCCGCGCGCGC TCGCGCTCGTCCTGCCGCGGCTCGCCGGCTACGCCTGGCCCGGGAACGTCCGCGAGCTCGAGAACGTGCTCGAGCGGGTG GCGGCGCTGTTCGTCGATCGGGGACCGCGCGCTCGCATCCCGGAGGAGGAGCTGCGCGCCGCGATCCCCGAGCTCCTCGC CCGGCCGGGCGCGACGCCGGCGGCGCCCGCCGCGCCGCGGGCGGATCTGCGCGCGGCGCGGCGCGAGCAGGAGCGCGCGC ACGTCGAGCGCGTCCTCGCCGAGTGTGGCGGGAACCAGGCGGAGGCGGCCCGCCTCCTCGGCATCGGCCGCACGACCCTG TACAGGAAGCTCGGGCGCGTGCGCTGA Protein sequence : MAIDADRRPIVWAFSTSRLRHVFESVAPLLADVAEVRVFDKGFEEALQVSRALVEAGEEVDAFVAAGSNGAYLRDHASVP VVVVMASTLDALQALVQARKLSNRIAVVNFRRVVAGLEQGIGLMEDTTIVQRPYVTPEDAKAHVADLAAQGFGVVVGPGP VCDLAERAGLPSVLLYGQDSLSEAIRHAAEVAHIARAAEAKRLDVERVLRHLDVGVVAVDGEERIQTVNPALQRLLGVTA PELTGRRLSAVAPELSLARVLETGTPELDVVQRLGSRTLVVSRVPLREGGAQRGALLTCQDAAVIQRLERGLRTEHRPPR FVARFDLGGLVGASPAIAGVRALAERYARTDATVLITGESGTGKEMVAQGIHRASRRRDRPFVAVNCAAFPETLLEAELF GHEEGAFTGARRGGRPGLFEAAHTGTLFLDEIGDVPTTLQTRLLRVLQERQVLRLGSNHPTPVDVRVVAATHRDLRAATA RGEFREDLFYRLNILPLHVPPLRERGEDVQAIAAELLKRALLRHGEPDAHPRALALVLPRLAGYAWPGNVRELENVLERV AALFVDRGPRARIPEEELRAAIPELLARPGATPAAPAAPRADLRAARREQERAHVERVLAECGGNQAEAARLLGIGRTTL YRKLGRVR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAK01495.1 | propionate catabolism operon regulator prpR | Not tested | PAGI-1 | Protein | 5e-94 | 45 |
