Gene Information

Name : Bcer98_0568 (Bcer98_0568)
Accession : YP_001373912.1
Strain : Bacillus cytotoxicus NVH 391-98
Genome accession: NC_009674
Putative virulence/resistance : Virulence
Product : sphingomyelin phosphodiesterase
Function : -
COG functional category : R : General function prediction only
COG ID : COG3568
EC number : 3.1.4.12
Position : 649035 - 650027 bp
Length : 993 bp
Strand : +
Note : PFAM: Endonuclease/exonuclease/phosphatase; KEGG: bat:BAS0644 sphingomyelinase C

DNA sequence : 
ATGATGAAAAGTAAGTTGTTAAAAGGTATTCTTAGCTTTGGAATTGGTTTGACAGCCTTATATAGTTCTTCTGCACAGGC
TGAAACATCTAGTGATAGCGATACATTCAAAATAATGACACATAATGTATATATGCTATCAACAAATTTGTATCCAAATT
GGGGACAAAAGGAGCGAGCAGACTTAATTGGGGAAGCGAATTATATAAAAAATCAAGATGTTGTTATATTAAATGAAGTA
TTTGATAATAAAGCTTCAGACAGTCTATTGCAAAATCTAAAGAAAGAGTATCCAAACCAAACAGCGGTATTAGGTCGCGT
TAATGGAGATATGTGGGATCAAACGTTAGGTAATTATTCTTCTGTAGCCCCTGAAGATGGAGGAGTTGCAATCGTAAGTA
AGTGGCCAATTGTGGAAAAGGTACAATATGTATTTCAGAAAGGATGCGGGCCAGACAATCTATCTAATAAAGGATTTGTC
TACACAAAAATTAAGAAAGATGATCGTTTTATTCACGTAATTGGAACGCACCTACAAGCAGAGGATAATCAGTGTGGAAA
CATTTCACCATCATCGGTGCGCACAAACCAATTAAAAGAAATTCAAGAGTTTATTCAAAAGAAAAATATTCCAAGTGACG
AGTATGTAGTCATTGGTGGAGATATGAATGTAAATAAAATAAACAGTAATCATACGTCAGAATATGAATCTATGTTTAAA
ACATTACATGCAAGTGTACCATCGTATACAGGACATACTGCAACTTGGGATGCAACAACAAATAGTATTGCAAAATACAA
CTTCCCAGAGGCACCAGCGGAATATTTAGACTACATCGTTACAAGTAAAGATCATGCGACTCCAACATATTTAGAGAATA
AAGTATTACAGCCAAAATCTCCTGAATGGTCTGTCACTTCATGGTTTAAAACATATACATATAATGATTATTCAGATCAT
TATCCAGTAGAGGCAACAATCATTATGAAATAA

Protein sequence : 
MMKSKLLKGILSFGIGLTALYSSSAQAETSSDSDTFKIMTHNVYMLSTNLYPNWGQKERADLIGEANYIKNQDVVILNEV
FDNKASDSLLQNLKKEYPNQTAVLGRVNGDMWDQTLGNYSSVAPEDGGVAIVSKWPIVEKVQYVFQKGCGPDNLSNKGFV
YTKIKKDDRFIHVIGTHLQAEDNQCGNISPSSVRTNQLKEIQEFIQKKNIPSDEYVVIGGDMNVNKINSNHTSEYESMFK
TLHASVPSYTGHTATWDATTNSIAKYNFPEAPAEYLDYIVTSKDHATPTYLENKVLQPKSPEWSVTSWFKTYTYNDYSDH
YPVEATIIMK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hlb NP_646757.1 truncated beta-hemplysin Not tested ¥ÕSa3 Protein 7e-69 58
hlb NP_375112.1 hypothetical protein Not tested ¥ÕSa3 Protein 7e-69 58
truncated-hlb NP_372527.1 hypothetical protein Not tested ¥ÕSa3 Protein 4e-69 58
unnamed CAA70683.2 sphingomyelinase-c Virulence LIPI-2 Protein 5e-77 58

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Bcer98_0568 YP_001373912.1 sphingomyelin phosphodiesterase VFG1798 Protein 5e-75 59
Bcer98_0568 YP_001373912.1 sphingomyelin phosphodiesterase VFG0674 Protein 3e-77 58