Gene Information

Name : Bcer98_0241 (Bcer98_0241)
Accession : YP_001373602.1
Strain : Bacillus cytotoxicus NVH 391-98
Genome accession: NC_009674
Putative virulence/resistance : Unknown
Product : RNA-binding S1 domain-containing protein
Function : -
COG functional category : K : Transcription
COG ID : COG2183
EC number : -
Position : 252018 - 254186 bp
Length : 2169 bp
Strand : +
Note : PFAM: RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold; KEGG: bce:BC0267 transcription accessory protein (S1 RNA binding domain)

DNA sequence :
ATGGAAATGGTAGATAATCGTCAAGTGTTAATGAAAATGTTAGTAAAAGAATTAGGCTTTACTGAAAAACAAATTCGTCA
TGTGATTCAATTAACAGAAGAGGGTAACACAGTTCCATTTATTGCTCGTTACCGAAAAGAATGGACAGGTTCTTTAGATG
AAGTGCAGATTCGTGCAATCTTAGATAGATGGCAGTATGTCATGCAACTCGAAGAGCGAAAAGAAGAAGTGATTCGTCTA
ATCGAGGAAAAGGGTAAATTGACAGAAGAGTTGCACCAACAGATTATTGCTGCAACAAAATTACAGGAAGTAGAGGATTT
ATACCGTCCTTATAAAGAAAAGAGAAGAACAAAAGCAACGATCGCAAAGGAAAAAGGGCTAGAGCCGTTAGCAGAATGGT
TATTGCTATTTTCAAAAGAGGAACCGCTATTTAAAGCAAAGTCCTTTATAAATACTGAGAAAAAAGTGGACTCGGCAGAG
GACGCATTGCAAGGAGCGCAGGATATTATTGCGGAAATGATTTCAGATGACGCTTCCTATCGCACTTGGATTCGAAATGT
TACGTTTAAAAAGGGAATGATTTCTTCTTCTGTGAAAGATGAAGAAAAAGATGAAAAGAACATATATGAGATGTATTACG
GTTATGAAGAAGCAATCCAAAAAATTGTACCACATCGTGTGCTAGCTATGAATCGTGGTGAAAAAGAAGAGATATTAAAA
GTTTCTATTGTGCCGCCTGTAGAAGAAGTGCTTCGTTTTTTACATAAGAAAGTGATTTGTGATGAATCTTCGAAAAGTGC
CATGTATGTACAATTAGCGCTTGAAGATGGATATAAACGTTTAATTCAGCCGTCGATTGAAAGGGAAATTCGTAAGGAAT
TAACAGAAGTAGCAGAAGAGCAAGCGATTCATATTTTTGCTGAGAATTTGCGTAACTTATTATTGCAGCCGCCTATGAAA
GGGAAAGTCGTATTGGCGGTAGATCCTGCATATAGAACAGGCTGTAAATTAGCAGTAGTCGATGATACAGGAAAGGTACT
GCATATTGATGTCATTTATCCGCATCCGCCTGTGAAAAAGTACGATGATGCAAAACAGAAAGTTCTTTCTATTATAAATC
AGTATAAAGTACAAATGATTGCAATTGGAAATGGAACAGCTTCAAGGGAAACAGAAGAATTTATTGTGGATGCCTTGCAA
GATGTTAAACAAGATGTATTTTACATGATTGTCAATGAGGCGGGAGCTAGTGTATATTCAGCTTCTGATTTAGCACGTGA
AGAATTTCCGGATTTACAAGTTGAGGAGAGAAGTGCGGTTTCAATTGGTCGTCGTTTACAAGATCCGCTTGCTGAATTGG
TAAAGATAGATCCAAAATCAGTTGGAGTGGGGCAATATCAACATGATGTATCGCAAAAGAGATTGAACGAATCATTAACA
TTTGTAGTAGAAACAGCTGTTAACCAAGTTGGGGTAAATGTAAATACAGCTTCGGTGCCACTATTGCAATATGTATCAGG
ATTATCCAAAACAGTTGCGAAAAATATTGTTGTAAAACGCGAAGAGAATGGAAAATTTACAAATCGTGCAGAACTTAAGA
AAATACCGCGACTAGGTGCGAAAACATATGAACAATGTATCGGTTTCTTACGGATACTAGAAGGAGAAAACCCATTAGAC
CGAACAAGTATTCATCCTGAACAGTATAAGAATGTTGAATTGCTATTAAACAAAATAGGGTTAACAATTCAAGATGTAGG
AACACCAGAACTACAAAAACGTTTAGAAGGAGTAGACGTTTCGAAATTATCTTCAGAAACCAATATCGGTGAACCTACTT
TAATGGATATTATAGATGCTTTAATTAGCCCTGAACGCGACTTACGTGATGAATTACCGAAACCGTTGCTTAAAAAAGGT
ATTTTGAAACTAGAAGATTTAAAGCGCGGTATGGAATTAGAAGGGACTGTTCGAAACGTTGTTGATTTCGGTGCTTTTAT
AGATATTGGTGTGAAGCAAGATGGATTGGTACATATTTCTAAGTTAAGTAAGCAATTTGTAAAGCATCCATTAGATATTG
TGTCGGTTGGACAAATTGTAAAGGTATGGGTAGATGATGTGGATATGAAAAAGGGACGTGTAGCTTTATCCATGTTGCCT
ATCGAGTAA

Protein sequence :
MEMVDNRQVLMKMLVKELGFTEKQIRHVIQLTEEGNTVPFIARYRKEWTGSLDEVQIRAILDRWQYVMQLEERKEEVIRL
IEEKGKLTEELHQQIIAATKLQEVEDLYRPYKEKRRTKATIAKEKGLEPLAEWLLLFSKEEPLFKAKSFINTEKKVDSAE
DALQGAQDIIAEMISDDASYRTWIRNVTFKKGMISSSVKDEEKDEKNIYEMYYGYEEAIQKIVPHRVLAMNRGEKEEILK
VSIVPPVEEVLRFLHKKVICDESSKSAMYVQLALEDGYKRLIQPSIEREIRKELTEVAEEQAIHIFAENLRNLLLQPPMK
GKVVLAVDPAYRTGCKLAVVDDTGKVLHIDVIYPHPPVKKYDDAKQKVLSIINQYKVQMIAIGNGTASRETEEFIVDALQ
DVKQDVFYMIVNEAGASVYSASDLAREEFPDLQVEERSAVSIGRRLQDPLAELVKIDPKSVGVGQYQHDVSQKRLNESLT
FVVETAVNQVGVNVNTASVPLLQYVSGLSKTVAKNIVVKREENGKFTNRAELKKIPRLGAKTYEQCIGFLRILEGENPLD
RTSIHPEQYKNVELLLNKIGLTIQDVGTPELQKRLEGVDVSKLSSETNIGEPTLMDIIDALISPERDLRDELPKPLLKKG
ILKLEDLKRGMELEGTVRNVVDFGAFIDIGVKQDGLVHISKLSKQFVKHPLDIVSVGQIVKVWVDDVDMKKGRVALSMLP
IE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
NMB0075 NP_273139.1 transcriptional accessory protein Tex Not tested IHT-A Protein 5e-124 45