Gene Information

Name : Oant_3700 (Oant_3700)
Accession : YP_001372235.1
Strain :
Genome accession: NC_009668
Putative virulence/resistance : Virulence
Product : ABC-3 protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1108
EC number : -
Position : 1086757 - 1087617 bp
Length : 861 bp
Strand : +
Note : PFAM: transport system permease protein; ABC-3 protein; KEGG: rle:RL3886 putative Fur regulated salmonella iron ABC transporter component

DNA sequence : 
ATGACCGTATTACTTGAGCCGTTCAGTTATAGCTACATGCTGAATGCGATGTGGGTTTCGGCGCTGGTGGGCGGGGTATG
TGCCTTTCTTTCGGCTTATCTCATGCTGAAAGGCTGGTCGCTGATTGGCGACGCTCTATCCCATTCCATCGTCCCTGGCG
TTGCGGGTGCTTATATGCTTGGCCTCCCCTTCTCCATCGGCGCATTTTTCTCTGGCGGTCTCGCCGCAGCAGCGATGCTC
TTTCTCAACCAACGTACAAAGCTGAAGGAAGATGCTATCATCGGTCTGATCTTCTCGTCATTCTTCGGACTTGGCCTCTT
CATGATCTCGTTGAAGCCGACGGCCGTCAGCATTCAGACCATCGTTCTCGGCAATATCCTCGCCATCACACCGGAAGATA
CTCTACAACTGGCAATCATCGGCTTCGTTTCCCTGTCGCTACTTCTTTTAAAGTGGAAAGATCTGATGGTAGTGTTCTTC
GATGAAAACCATGCGCGTTCGATCGGTCTCAAGCCCAATCTGTTGAAGATCATGTTCTTCACATTGCTGTCGGCATCGAC
TGTCGCCGCGATGCAGACGGTTGGTGCCTTTCTCGTCATCTGTATGGTGGTAACGCCCGGTGCAACCGCATATCTACTGA
CAGACCGGTTTTCGCGACTGCTTTGGATTGCTGTTGCTATCGGCTCCGTCACAAGCTTCTCAGGAGCCTATGTAAGCTAT
TTTCTGGACGGTGCGACGGGAGGCATCATCGTGGTTCTCCAGACGCTTGTCTTCCTCAGTGTATTTCTGCTTGCTCCAAA
GCATGGGCTGCTGGCCGCACGCCGCAAAGCGGCAATCGCTCTAAGGGAATTCCAGCAATGA

Protein sequence : 
MTVLLEPFSYSYMLNAMWVSALVGGVCAFLSAYLMLKGWSLIGDALSHSIVPGVAGAYMLGLPFSIGAFFSGGLAAAAML
FLNQRTKLKEDAIIGLIFSSFFGLGLFMISLKPTAVSIQTIVLGNILAITPEDTLQLAIIGFVSLSLLLLKWKDLMVVFF
DENHARSIGLKPNLLKIMFFTLLSASTVAAMQTVGAFLVICMVVTPGATAYLLTDRFSRLLWIAVAIGSVTSFSGAYVSY
FLDGATGGIIVVLQTLVFLSVFLLAPKHGLLAARRKAAIALREFQQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitC YP_217783.1 iron transporter: fur regulated Virulence SPI-1 Protein 6e-74 81
sitC NP_461784.1 permease Virulence SPI-1 Protein 6e-74 81
sitC NP_457257.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 5e-74 81
sitC NP_806466.1 iron transporter inner membrane protein Virulence SPI-1 Protein 5e-74 81
sitC AAD41067.1 SitC Virulence centisome 63 pathogenicity island Protein 4e-74 81
sitD YP_217784.1 iron transporter: fur regulated Virulence SPI-1 Protein 5e-39 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Oant_3700 YP_001372235.1 ABC-3 protein BAC0351 Protein 3e-74 81
Oant_3700 YP_001372235.1 ABC-3 protein BAC0441 Protein 2e-66 69
Oant_3700 YP_001372235.1 ABC-3 protein BAC0442 Protein 2e-28 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Oant_3700 YP_001372235.1 ABC-3 protein VFG0527 Protein 2e-74 81