Gene Information

Name : Oant_3698 (Oant_3698)
Accession : YP_001372233.1
Strain :
Genome accession: NC_009668
Putative virulence/resistance : Virulence
Product : periplasmic solute binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0803
EC number : -
Position : 1084956 - 1085858 bp
Length : 903 bp
Strand : +
Note : PFAM: periplasmic solute binding protein; KEGG: sme:SMc02509 putative iron-binding periplasmic ABC transporter protein

DNA sequence : 
ATGCTGCGTCGTATTTTACGAACAACGACACTCGGTCTCGTGAGCGGAGCTCTTCTCTGGACAAGCGCAAGCGTTGCTTT
TGCGGAGAAATTCAAGGCCGTGACGACATTTACTGTTATCGCCGATATTGCGCAGAATGTTGCGGGCGATGCCGCGACGG
TTGAGTCAATCACGAAGCCAGGTGCCGAGATCCACAATTATCAGCCAACACCGGGAGACCTGATTAAAGCCCAGGACGCC
AAGCTGGTCCTCTGGAATGGCCTTGGCCTGGAACTATGGTTCGAAAAATTCTTTTCACGTCTCAAGGATGTTCCAAGCGC
AGTTGTTTCCGATGGCGTTGAGCCAATCGATATCAGCGAGGGACCTTATAGCGGCAAGCCAAATCCGCATGCCTGGATGT
CACCGAATGCCGCATTGATCTACGTGGACAATATTCGGGATGCGTTCGTCAAAAATGATCCGGCGAACGCTGACATCTAC
AAGGCGAATGCAGAGATTTACAAAGCGAAGATTAAAGCGACGATCGATCCTATCCGGGCTGAGCTGGCAGCTATTCCTGA
AGACAAGCGTTGGCTCGTTTCAAGTGAAGGCGCATTCTCCTATCTGGCTCGGGACTTCGGTTTGAAAGAGCTTTATCTCT
GGCCAATCAATGCAGACCAACAGGGCACTCCACAGCAGGTGCGAAAAGTGATTGATGCAGTGCGTGAAAATGGCATTACG
GCTGTCTTTTCCGAAAGCACGGTTTCTCCTGCCCCAGCCAAGCAGGTCGCTCGTGAGACCAGCGCAAAATATGCCGGTGT
TCTCTATGTTGATTCACTTTCGGACCCCGACGGTCCCGTGCCGACATATATTGATCTCCTGAAAGTCACCTCCAGCGCGA
TTGCCCAAGGGCTCAAACAATGA

Protein sequence : 
MLRRILRTTTLGLVSGALLWTSASVAFAEKFKAVTTFTVIADIAQNVAGDAATVESITKPGAEIHNYQPTPGDLIKAQDA
KLVLWNGLGLELWFEKFFSRLKDVPSAVVSDGVEPIDISEGPYSGKPNPHAWMSPNAALIYVDNIRDAFVKNDPANADIY
KANAEIYKAKIKATIDPIRAELAAIPEDKRWLVSSEGAFSYLARDFGLKELYLWPINADQQGTPQQVRKVIDAVRENGIT
AVFSESTVSPAPAKQVARETSAKYAGVLYVDSLSDPDGPVPTYIDLLKVTSSAIAQGLKQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitA YP_217781.1 iron transporter: fur regulated Virulence SPI-1 Protein 5e-94 71
sitA NP_457255.1 Iron transport protein, periplasmic-binding protein Virulence SPI-1 Protein 3e-94 68
sitA NP_806464.1 iron transporter periplasmic-binding protein Virulence SPI-1 Protein 3e-94 68
sitA NP_461782.1 periplasmic binding protein Virulence SPI-1 Protein 3e-94 68
sitA AAD41065.1 SitA Virulence centisome 63 pathogenicity island Protein 3e-94 68

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Oant_3698 YP_001372233.1 periplasmic solute binding protein BAC0349 Protein 2e-94 68
Oant_3698 YP_001372233.1 periplasmic solute binding protein BAC0439 Protein 8e-92 65

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Oant_3698 YP_001372233.1 periplasmic solute binding protein VFG0525 Protein 1e-94 68