Gene Information

Name : Oant_2826 (Oant_2826)
Accession : YP_001371364.1
Strain :
Genome accession: NC_009668
Putative virulence/resistance : Virulence
Product : transport system permease
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0609
EC number : -
Position : 101893 - 102936 bp
Length : 1044 bp
Strand : -
Note : PFAM: transport system permease protein; KEGG: sme:SMa1745 putative iron uptake protein

DNA sequence :
ATGACTTTCGCCCGCGTCCGGCGCTCAAGCCAGCCGATCACTATATATCGGTCCAACAAAGCAAGGACCGGCTGGCTCGG
CGCCGTCGTCCTTCTTCTCGTGATCCTCTGCGTTCTATCCGTGTCGCTCGGCACGCGTGAAGTGCCGTGGTCTGACATTG
TCGCGGCCCTGCGCGGCCATATGGACACCGTCGGACAGGCCGCTGTCGCCATGCGCATTCCGCGCACCTTGCTGGCGGTT
CTCGCCGGTGCGGCACTCGGACTGGCGGGCGCGATCATGCAAGGCATCACCCGCAATCCGCTGGCGGACCCCGGCATTCT
GGGCATCAATATGGGCGCGTCGCTCTCCGTCGTCATCGGCGTTGCGTGGTTCAACATCGTTTCTGCACCAGCTTATATCT
GGGCAGCAATATTCGGTGCCGGTTGTGCCGCCGTCTTCGTCTATATGGTCGGATCGCTTGGCCGTGGTGGCGCGACACCG
CTCAAGCTCGCGCTGGCCGGTGCAGCCACGTCGGTGGCATTTTCCTCGTTGGTTATCGCCATCGTGCTACCCCGCAACGA
CATCGCCGGCGGCATTCGCGCCTGGCAGATCGGTGGCGTTGGCGGTGCAACTTTCGACCGACTCTCTTATGTGCTGCCGT
TTCTCGCCGCCGGTTTCATTGTCAGCCTTCTATTGGCGCGCAAACTGAACTCGCTCGCACTCGGCGACGAACTTGCCGCC
GGGTTGGGAGAAAAGGTTGCCTTCGCACGCGCAGTTGCGGCGCTCGGCGCAATTCTGCTGTGTGGCGCAACCACCGCCAT
CTGCGGTCCCATCGGCTTTGTGGGTCTGGTTGTGCCGCATCTCTGTCGCCTGCTGGTAGGCGTGGATCACCGCTGGCTGT
TACCGTTCTCGGCCCTCAGCGGAGCCTGTCTCCTGCTTGTTGCCGATATTGTCGGACGCCTCATTGCCCGTCCTGCCGAA
CTCGATGTCGGGATCGTCACCGCCCTGATCGGTGCGCCGTTCTTCATCTGGATCGTCAGACGCCAACGGGTTCGCGAGTT
GTAA

Protein sequence :
MTFARVRRSSQPITIYRSNKARTGWLGAVVLLLVILCVLSVSLGTREVPWSDIVAALRGHMDTVGQAAVAMRIPRTLLAV
LAGAALGLAGAIMQGITRNPLADPGILGINMGASLSVVIGVAWFNIVSAPAYIWAAIFGAGCAAVFVYMVGSLGRGGATP
LKLALAGAATSVAFSSLVIAIVLPRNDIAGGIRAWQIGGVGGATFDRLSYVLPFLAAGFIVSLLLARKLNSLALGDELAA
GLGEKVAFARAVAALGAILLCGATTAICGPIGFVGLVVPHLCRLLVGVDHRWLLPFSALSGACLLLVADIVGRLIARPAE
LDVGIVTALIGAPFFIWIVRRQRVREL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SPN23F_09540 YP_002510937.1 ferric siderophore ABC transporter permease Virulence PPI-1 Protein 1e-38 47
SP_1033 NP_345508.1 iron ABC transporter permease Virulence PPI-1 Protein 1e-38 47
fecC AAL08453.1 FecC Virulence SRL Protein 3e-16 41
fagA YP_003782432.1 integral membrane protein Virulence PiCp 1 Protein 9e-13 41
fagA YP_005684490.1 hypothetical protein Not tested PiCp 1 Protein 9e-13 41
fagA YP_005680309.1 hypothetical protein Not tested PiCp 1 Protein 9e-13 41
fagA YP_005682399.1 hypothetical protein Virulence PiCp 1 Protein 9e-13 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Oant_2826 YP_001371364.1 transport system permease VFG0926 Protein 2e-26 46
Oant_2826 YP_001371364.1 transport system permease VFG1044 Protein 2e-16 41