Gene Information

Name : Oant_2824 (Oant_2824)
Accession : YP_001371362.1
Strain :
Genome accession: NC_009668
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 100023 - 100859 bp
Length : 837 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMa1741 putative iron uptake ABC transporter, ATP-binding protein

DNA sequence : 
ATGACCGATCACACTCTCATCGTGCGTGAGCTGACCACCGGCTATGGTGACAGGCTTGTGCTGGACGGTCTCGATCTTGA
AATCCCCTCCGGCAAGGTGACCGCGATAGTCGGAGCGAATGCCTGTGGAAAATCCACGCTTTTGCGAACGATGTCCCGGC
TTCTGGTCCCGCGCCACGGGCAGGTGCTGCTTGACGGCAAGTCGATCCACACCCTCCCCTCCCGGCAACTGGCACAGACG
CTCGGTCTGCTGCCGCAATCGCCGGTGGCGCCAGAAGGCATATTGGTCGCCGATCTCGTCAGCCGAGGTCGAAACCCCTA
TCACGGCGTTTTCTCGCAATGGACGCGGGCCGATGACGAAGCAATCGCAGCGGCACTTGAAGCAACTAGGACAACCGAAC
TGGCTGACAGACCGGTAGACGAACTTTCCGGCGGCCAGCGCCAGCGCGTGTGGATTGCGATGGCACTGGCGCAGCAGACC
GACATCCTCCTGTTGGACGAGCCGACGACCTTTCTCGACATCAGTCACCAGGTTGAGGTTCTGGACCTCCTCACCGACCT
CAACCGGGAGCGCGGAACCACAATCGTCATGGTTCTGCACGATCTCAATCTTGCTGCCCGCTATGCAGATTTTCTGGTCG
CAATGGCTAACGGACAGCTACACGTAACCGGGACGCCTGACGAAGTGCTGACGGAACAAAATGTCCGCGATGTCTTTCAT
TTGGAAAGCCGCATCATGACCGACCCGACCTCCGGTCGCCCCATCATGCTGCCTTTGGGACGTCATCGCCTCCGTCAAGA
ACGTCTTGAAACGCAGCTCGAACCCTCAGACGGATAG

Protein sequence : 
MTDHTLIVRELTTGYGDRLVLDGLDLEIPSGKVTAIVGANACGKSTLLRTMSRLLVPRHGQVLLDGKSIHTLPSRQLAQT
LGLLPQSPVAPEGILVADLVSRGRNPYHGVFSQWTRADDEAIAAALEATRTTELADRPVDELSGGQRQRVWIAMALAQQT
DILLLDEPTTFLDISHQVEVLDLLTDLNRERGTTIVMVLHDLNLAARYADFLVAMANGQLHVTGTPDEVLTEQNVRDVFH
LESRIMTDPTSGRPIMLPLGRHRLRQERLETQLEPSDG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 1e-59 53
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 1e-65 53
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 1e-65 53
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 3e-51 51
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 3e-48 47
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 2e-48 47
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 2e-48 47
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 3e-48 47
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 1e-49 45
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 4e-51 42
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 4e-51 42
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 4e-51 42
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 4e-51 42
CDCE8392_1767 YP_005134301.1 iron complex transport system ATP-binding protein Virulence Not named Protein 2e-28 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Oant_2824 YP_001371362.1 ABC transporter BAC0164 Protein 2e-51 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Oant_2824 YP_001371362.1 ABC transporter VFG0925 Protein 5e-59 52
Oant_2824 YP_001371362.1 ABC transporter VFG1042 Protein 2e-51 51