Gene Information

Name : Oant_3252 (Oant_3252)
Accession : YP_001371789.1
Strain :
Genome accession: NC_009668
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 572059 - 572721 bp
Length : 663 bp
Strand : -
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rpc:RPC_4906 two component transcriptional regulator, winged helix family

DNA sequence : 
ATGCGCGTGCTGATAGTCGAAGATGATGCCGTCCTCAGAGACGGATTGACGGTGGGCCTTTCGATTGGCGGCTTCACCGC
CGATGCGGTCAAAACCTGCGAAGAAGCCGGCGCAGCTCTCACGAACCATGAGTTCGATGCGCTGGTGCTTGACCTGATGC
TTCCCGACGGTTCCGGCCTCGACGTGCTGAAATCCCTGCGGGAACGGCAGGACGCCACGCCCGTCCTCCTCCTGACTGCG
CGTGATCAGGTCGCCGACCGGATTCACGGACTGGATGCGGGGGCCGACGACTATCTCGGCAAGCCGTTCGACCTCGACGA
GGTCGCGGCGCGGCTGCGCGCGCTCGTCCGCCGTGCCGCTGGCCGGCCGCAGGCGCTTATCGAATGGCGCGGCCTGCGGC
TCGATCCTGCAAACCAGAATGTCGAACACCAAGGCGAACCCATCCGCCTGTCGCGGCGCGAATACTCGATTTTGCATGCC
CTCATGATCCATCCCGGCCGGATCCTGTCGCGGAGCCAGATCGAGGAGAAGCTTTACGGCTGGCAGGAGGAGGTCGAGAG
CAATGCTGTCGAGGTCCACATCCATCATCTTCGCGGCAAGCTGGGACCGGGCATGATCCAGACCGTCCGTGGGATCGGCT
ATCGCCTCGGAGACGAACCGTGA

Protein sequence : 
MRVLIVEDDAVLRDGLTVGLSIGGFTADAVKTCEEAGAALTNHEFDALVLDLMLPDGSGLDVLKSLRERQDATPVLLLTA
RDQVADRIHGLDAGADDYLGKPFDLDEVAARLRALVRRAAGRPQALIEWRGLRLDPANQNVEHQGEPIRLSRREYSILHA
LMIHPGRILSRSQIEEKLYGWQEEVESNAVEVHIHHLRGKLGPGMIQTVRGIGYRLGDEP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 4e-33 51

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Oant_3252 YP_001371789.1 two component transcriptional regulator BAC0487 Protein 2e-32 44
Oant_3252 YP_001371789.1 two component transcriptional regulator NC_002516.2.879194.p Protein 1e-24 41
Oant_3252 YP_001371789.1 two component transcriptional regulator BAC0197 Protein 5e-27 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Oant_3252 YP_001371789.1 two component transcriptional regulator VFG0473 Protein 1e-36 43