Gene Information

Name : Oant_4085 (Oant_4085)
Accession : YP_001372617.1
Strain :
Genome accession: NC_009668
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 1515253 - 1516047 bp
Length : 795 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pau:PA14_10180 ferric enterobactin transport protein FepC

DNA sequence : 
ATGATGCAACGCCTGCATGCGGACGCCGTTACATTGCGCTACAACGATCAGATTGTCGTCGAGAACTTGTCAGTCATTAT
TCCCGATACGTCTTTCACCGTCATTGTCGGCCCCAATGCGTGCGGGAAGTCCACATTGCTGCGTGCCTTGTCACGATTGC
TTGCACCGGCCAGTGGAAAAGTCGTGCTGGATGGCAGGAATATAAGCCAATTTCCGGCAAAGGAAGCTGCGCGCAGGCTC
GGTCTTCTTCCGCAAACCTCGGTTGCTCCCGATGGCATCACCGTTGCCGATCTGGTGTCACGCGGTCGTTATCCGCATCA
GTCCTTTCTGCGACAATGGTCGGTGAAAGACGAAGAAGCGGTAGCACTCGCCATGGAAGCCACCCGCATTTCCGACCTCG
CCAACCGTTCAGTCGACGAACTTTCCGGCGGACAGCGTCAGCGCGTCTGGATTGCGCTTGTGCTGGCCCAGGAAACACCG
ATCCTTCTGCTCGATGAACCGACAACCTATCTCGATATCGCGCATCAGATCGAACTTCTGGAATTGCTGGCGGAACTTAA
CCGCGAGGGCCGGACTGTCGTTGCCGTACTACACGATCTCAATCATGCCTGCCGATATGCTTCGCATTTGGTGGCCATGC
GAAACGGGGCGATCATGGCGGAAGGCACTCCATCCGAGATCGTTACAGAAAAGCTGATGGAAGATGTGTTCGGCCTTGCA
TCGGTAATCATTACCGATCCGGTTTCGGGAACGCCGCTCGTCGTCCCCCGAGGAACGACCCCGCAATCTCCGTGA

Protein sequence : 
MMQRLHADAVTLRYNDQIVVENLSVIIPDTSFTVIVGPNACGKSTLLRALSRLLAPASGKVVLDGRNISQFPAKEAARRL
GLLPQTSVAPDGITVADLVSRGRYPHQSFLRQWSVKDEEAVALAMEATRISDLANRSVDELSGGQRQRVWIALVLAQETP
ILLLDEPTTYLDIAHQIELLELLAELNREGRTVVAVLHDLNHACRYASHLVAMRNGAIMAEGTPSEIVTEKLMEDVFGLA
SVIITDPVSGTPLVVPRGTTPQSP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 7e-59 55
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 5e-50 50
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 1e-52 50
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 1e-52 50
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 6e-58 50
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 6e-58 50
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 6e-58 50
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 6e-58 50
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 7e-47 47
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 3e-45 42
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 3e-45 42
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 3e-45 42
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 3e-45 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Oant_4085 YP_001372617.1 ABC transporter BAC0164 Protein 3e-50 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Oant_4085 YP_001372617.1 ABC transporter VFG0925 Protein 3e-68 63
Oant_4085 YP_001372617.1 ABC transporter VFG1042 Protein 3e-50 50