Gene Information

Name : Oant_0697 (Oant_0697)
Accession : YP_001369250.1
Strain :
Genome accession: NC_009667
Putative virulence/resistance : Virulence
Product : polysaccharide biosynthesis protein CapD
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1086
EC number : -
Position : 723617 - 725485 bp
Length : 1869 bp
Strand : +
Note : PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: bms:BR0510 epimeras

DNA sequence :
ATGAGTTTGAAATATCCATGGCAGAGACTGGCGCTTTTGCCCCGCGCCAGCAAACAGATCATTCTGATGCTGAGCGACTG
TGTTCTGCTGTTGCTGAGTGCTTATCTGGCGTTTGTCATCCGTCTTGGCTTCGTTTTTGTACCGAACGAAGGGCAGACGT
TCCTGATTTTCATCGCGCCCGTTCTGGCAATTCCGGTATTCATCCGGTTTGGACTTTACCGCGCCATCATCCGTTATCTG
GCTGAACGCGCGATCTGGCCGATTTTCCAGGCTACCGCCATCGCCGCGCTTTTCTGGGTTGCGCTCGTTTTCCTGATGGA
ACTTTACGGTAGTACCGGTCTGCCGCGTTCGGTACCGTTACTCTACTGGCTTTTGAGCACAGTGTTCATATCGGCCAGCC
GTTTCGGTGCGAAGTGGCTTTTGCGTAGCTCCGAGACGGACAAACGATATACGAGTTCTGCCTTGATTATCGGCGTGGGA
GAACCCGCCCGCCAGCTCGCGACGGCGCTCCGCAGCCATAGCGACACGTTGGTTGTCGGCTTCGTCGATCCTGATGGCCA
GCTTAATGGCATGGATATAATCGGGCTGCGGGTCTATGGCGTGGAAGACATTCCCGCTTTGATCGAAAACTACGGTATCA
AGCAGGTGGTGGTATCGGAACCGGCGCTGGAACAAAAACAGCGCCAGGATTTTGCGCGGCTTCTAGGGCGGCTTCCTGTC
AGTACACGTATTCTTCCGCCAATCGCCGATCTGACGGCCGGGAAATACCTGGTCAGCTCGTTACGCAATGTGGAGATTGA
CGATCTGCTCGGACGTTCGCCTGTGCCGCCGGATGCTGCTTTGTTGCGAGAGGTGGTCGAGGGTCGACGCATCATGGTGA
CGGGGGCTGGCGGCTCTATCGGCAGCCAGCTCTGCCGTACCATCGCCCAGTGGAACCCTGCCTGCATCGTTTTGTTCGAG
TCGAGTGAATTTGCACTTTACAATATTGAAAGGCAGCTCAGACAGCTAGCAAGTTGCGAGATCGTGCCGATCCTTGGGAC
CGTCAGCAACCGGGACTGCGTCGAGAATGCCATTCGCGACAATAATGTCGATACGGTCTATCATTGTGCGGCCTATAAGC
ATGTGCCCCTTGTCGAGAAAAACCCGCTGGTTGGTATATTCAACAATGTGTTCGGCACGCTGGAAGTCGCACAGGCCGCT
CTCAACACTGATGTTGAGCGAATGGTCCTCATCTCGTCCGATAAGGCAGTGCGACCGACGAATGTGATGGGTGCAACCAA
GCGTTGGGCCGAGTTGGTCGTCTATTATTGCGGTTTGCTGGCAGAGCAATCTGGAAAGAAGAAAGCTTTCTATTCCGTCC
GCTTTGGCAATGTGCTGGGGTCGAACGGTTCGGTCGTCCCGCTCTTCCGCGAACAGATCGCCAATGGAGGTCCGATTACG
CTGACGCATGAGGACATGACCCGCTACTTCATGTCGATCAAGGAAGCCGCCGAGCTTATTGTACAGTCTGGCGGCATTGC
CGCGTCCGGCGACACGGTTCTTCTGGAGATGGGCGAGCCGGTGAAAATCCGCGACCTGGCAGAGAACATGATCCTGCTGG
CAGGGCTGACCATTCGAAACGACGAAAACCCGCACGGCGATATTACCATTGAGACGACGGGGATTCGCGAAGGCGAGAAG
ATGTATGAAGAGCTCTTCTACGATCCTGCGCAGGCGAAACCGACGCGCCATCCCAAGATAATGCGCGCTCCTCGGGGTAA
GAAGGCTGAGGTGGATGTTCCGGCCGGCCTCACTGCACTTCGTATCGCGATGGAAAGCGGCGATCTCGATGCGGTCCGCA
AGGTTCTGTTCGGCGTTATAACTTCCTGA

Protein sequence :
MSLKYPWQRLALLPRASKQIILMLSDCVLLLLSAYLAFVIRLGFVFVPNEGQTFLIFIAPVLAIPVFIRFGLYRAIIRYL
AERAIWPIFQATAIAALFWVALVFLMELYGSTGLPRSVPLLYWLLSTVFISASRFGAKWLLRSSETDKRYTSSALIIGVG
EPARQLATALRSHSDTLVVGFVDPDGQLNGMDIIGLRVYGVEDIPALIENYGIKQVVVSEPALEQKQRQDFARLLGRLPV
STRILPPIADLTAGKYLVSSLRNVEIDDLLGRSPVPPDAALLREVVEGRRIMVTGAGGSIGSQLCRTIAQWNPACIVLFE
SSEFALYNIERQLRQLASCEIVPILGTVSNRDCVENAIRDNNVDTVYHCAAYKHVPLVEKNPLVGIFNNVFGTLEVAQAA
LNTDVERMVLISSDKAVRPTNVMGATKRWAELVVYYCGLLAEQSGKKKAFYSVRFGNVLGSNGSVVPLFREQIANGGPIT
LTHEDMTRYFMSIKEAAELIVQSGGIAASGDTVLLEMGEPVKIRDLAENMILLAGLTIRNDENPHGDITIETTGIREGEK
MYEELFYDPAQAKPTRHPKIMRAPRGKKAEVDVPAGLTALRIAMESGDLDAVRKVLFGVITS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1D AAA64643.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 8e-70 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Oant_0697 YP_001369250.1 polysaccharide biosynthesis protein CapD VFG0029 Protein 1e-95 43
Oant_0697 YP_001369250.1 polysaccharide biosynthesis protein CapD VFG1300 Protein 1e-66 41