Gene Information

Name : Oant_0684 (Oant_0684)
Accession : YP_001369238.1
Strain :
Genome accession: NC_009667
Putative virulence/resistance : Virulence
Product : conjugation TrbI family protein
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG2948
EC number : -
Position : 709685 - 710860 bp
Length : 1176 bp
Strand : +
Note : PFAM: conjugation TrbI family protein; KEGG: sme:SMa1303 VirB10 transmembrane type IV secretion protein

DNA sequence :
ATGGCCGAGACTGAGGAACATCAGATCCCAGGCGAGCGCGCCGAAACGGTTACAGCTACACGCGTCGACAATAATCCTGT
TCTCAAGCGCGGTGCTGTTGCACTCGCCATTGTGTTGTTTATTGGCTTTGCTCTGTGGTCGACATCTGGAAACAAAACAA
AGGACAGCAATATCGAGACCGAGCGCGTCGTGATCCGCCAAACGACACCCTTTGAGGCGGCAAGAGAAAAGACAGAGCCG
GTTGAAGAAAAGCCGGTGGTAAAACTGCCAACACCGGTCCTTGAAGACCCCATGCCCCAAGTGGACGAATTGCTTGATGC
CGCCCGTCGTGCGCCCGTTATGGCCTATAGCGGGGGACAGAAAAATTCGGCCTTGCGAGGCGAAGGCGGGAACGGCAGTA
ATGCGGTGCCAGATGGGAATTTTGTGCCAATTGATGGCAATTTTATTGGCCAGAACCAGCAGAATGCCGACGAACAGCGG
TTCGAAAACCTTCTGCGACCGACCCGACTTGAGGGATCGCGCGCCGGTATGCTCGGAAATCGCGATTTCATCATCGCCAT
GGGTAGTTCGATCCCTTGTGTGCTCGAAACTGCACTTGCCTCTGATCAGCCGGGCTTTGCAAGCTGCGTGATCAACCGCG
ATGTTTTATCCGATAACGGCCGCGTGGTGCTGATGGAAAAGGGAACCCAGCTTGTCGGGGAATATCGTGGCGGTCTCCAA
CGGGGGCAAAAACGTCTGTTTGTGCTTTGGAACAGGGCGAAAACGCCGCAAGGTGTGGTCGTCACGCTTGCCTCGCCAGC
AACAGATGCGCTTGGCCGCGCTGGCGTTGGTGGGCAGGTCGATACGCATTGGTGGGAGCGCTTTGGTAGTGCGCTTCTCC
TTTCCGTCGTCGGCGATGCGACAAGTTACGCGAGCAGTCGTCTGCAAGACGGCAATTTTGATGCACAAAATACCGCGGAT
GCCGGCAAACAGGCTGCTGCCATTGCAGTAGAGCAATCAATTAATATTGCCCCGACACTCCACAAGCATCAGGGGGAATT
GGTCTCCATCTTTGTCGCTCGCGATCTCGATTTTGCAGGCGTTTACCAGCTCCGTGTAACCGAACCTAGAAATCGCATTC
TCGATCGGGCAGCTTTGGGTGATTTCCACCCGCCATCGACGCTTGTGACAAAATAG

Protein sequence :
MAETEEHQIPGERAETVTATRVDNNPVLKRGAVALAIVLFIGFALWSTSGNKTKDSNIETERVVIRQTTPFEAAREKTEP
VEEKPVVKLPTPVLEDPMPQVDELLDAARRAPVMAYSGGQKNSALRGEGGNGSNAVPDGNFVPIDGNFIGQNQQNADEQR
FENLLRPTRLEGSRAGMLGNRDFIIAMGSSIPCVLETALASDQPGFASCVINRDVLSDNGRVVLMEKGTQLVGEYRGGLQ
RGQKRLFVLWNRAKTPQGVVVTLASPATDALGRAGVGGQVDTHWWERFGSALLLSVVGDATSYASSRLQDGNFDAQNTAD
AGKQAAAIAVEQSINIAPTLHKHQGELVSIFVARDLDFAGVYQLRVTEPRNRILDRAALGDFHPPSTLVTK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
vblB10 YP_001610350.1 VblB10 protein Virulence Not named Protein 1e-74 55
virB10 YP_001610006.1 VirB10 protein Virulence Not named Protein 2e-81 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Oant_0684 YP_001369238.1 conjugation TrbI family protein VFG2239 Protein 3e-81 55