Name : ureC (Oant_2441) Accession : YP_001370984.1 Strain : Genome accession: NC_009667 Putative virulence/resistance : Virulence Product : urease subunit alpha Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG0804 EC number : - Position : 2569022 - 2570725 bp Length : 1704 bp Strand : - Note : ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alp DNA sequence : ATGGGAAGGATCTCAAGACAGGCCTATGCCGAACTGTATGGCCCGACCAAGGGTGACCGTTTGCGTCTGGCCGATACAGA ACTCATCATCGAGGTCGAGGAAGATCGCTGCATCTACGGCGAAGAAGTAACCTTCGGCGGCGGCAAGGTCATTCGCGACG GTATGGGGCAGGGGCAACGACCCTCGTCCGAAACCGCCGATCTGGTAATCACCAATGTCATCATTCTCGACTATTGGGGC ATCATCAAAGCCGATGTCGGCATCAAGGAAGGTCGTATCTCAGGGATCGGCAAGGCCGGTAATCCCGATATTCAGCCCGG CGTCGACATTATCGTCGGGCCTGCGACCGACGTCATTGCAGGCGAAGGCAAGATTCTCACCGCTGGCGGTATCGACACCC ATATTCACTTCATTGCGCCGCAACAGGCCGAAGAAGCTCTGGCTAGCGGTACAACGACTTTGGTTGGCGGCGGAACGGGG CCGACGGTCGGCACGCTAGCAACCACGGTTACACCGGGGCCATGGGCTATCCATCGCATGCTTGAGGCTGTCGAAGCGCT TCCGATCAATGTGGGACTGCTCGGCAAAGGCAATGCAAGCAAGCCGGAACCGCTTCGCGAGCAGATCAGAGCCGGTGCTG TCGGCCTGAAGCTGCATGAGGACTGGGGAACCACGCCAGCCGCCATCGATAATTGCCTGAACGTTGCCGATGAGGAAGAC ATTCAGGTCGCTATCCATACGGATACGCTGAACGAGAGCGGGTTCGTCAAGGATACCTTTGCTGCCATGAAAGGCCGAAC CATCCACAGTTTCCATACGGAAGGTGCCGGTGGCGGCCATGCGCCGGATATCATCACAGCGGCGGGCGAAGAAAATATCC TGCCGTCCTCAACCAATCCGACCCGCCCCTACACCATCAACACGGTCGATGAACATCTCGATATGCTGATGGTCTGTCAC CATCTCAGTCCGAAAATCCCCGAGGATGTGGCATTCGCGGAATCCCGCATCCGGCGCGAAACCATCGCCGCCGAAGACAT TCTCCATGATCTGGGCGTGTTTTCGATGATGTCGTCGGATTCTCAAGCCATGGGCCGTATCGGTGAAACGACGCTGCGTT GCTGGCAAACTGCCCACAAGATGAAGGTGCAGCGAGGCCCGCTGAGCCAGGACAGCAGCCGGAATGACAATTTCCGCGCC AAACGTTATGTCGCCAAATATACGATCAATCCCGCAATCACACACGGGTTTGCCCATGAGATCGGCTCAATCGAAGTCGG AAAACGGGCCGATCTGGTGTTGTGGAAGCCGGAATTCTTCGGCGTGAAACCGAGCCTCGTCATGATCGGCGGCATGATTG CGATTGCACCGATGGGCGACCCAAACGCATCGATCTCGACGCCCCAGCCGGTTCATTATCGGCCAATGTATGGGGTATTG GGCCGGGCGCTTGGTTCCACCGGCGTCACCTTCGTCTCGAAAGCGGCGCTGGATGACGGCATCGGCGAGAAACTGAAACT CAGCAAGCAACTGGTTGCGGTGAAGGGCATCCGGACGATCCGCAAGAAGGACATGATCCATAACGGGCTTACACCCAAAC TGGAGGTTGATCCGCAGAGCTATCAGGTGCGGGTGGACGGTGAACTGATCACGTGCGAACCGGCTGATGTCCTGCCGATG ACGCAGCGTTATTTTCTGTTTTAG Protein sequence : MGRISRQAYAELYGPTKGDRLRLADTELIIEVEEDRCIYGEEVTFGGGKVIRDGMGQGQRPSSETADLVITNVIILDYWG IIKADVGIKEGRISGIGKAGNPDIQPGVDIIVGPATDVIAGEGKILTAGGIDTHIHFIAPQQAEEALASGTTTLVGGGTG PTVGTLATTVTPGPWAIHRMLEAVEALPINVGLLGKGNASKPEPLREQIRAGAVGLKLHEDWGTTPAAIDNCLNVADEED IQVAIHTDTLNESGFVKDTFAAMKGRTIHSFHTEGAGGGHAPDIITAAGEENILPSSTNPTRPYTINTVDEHLDMLMVCH HLSPKIPEDVAFAESRIRRETIAAEDILHDLGVFSMMSSDSQAMGRIGETTLRCWQTAHKMKVQRGPLSQDSSRNDNFRA KRYVAKYTINPAITHGFAHEIGSIEVGKRADLVLWKPEFFGVKPSLVMIGGMIAIAPMGDPNASISTPQPVHYRPMYGVL GRALGSTGVTFVSKAALDDGIGEKLKLSKQLVAVKGIRTIRKKDMIHNGLTPKLEVDPQSYQVRVDGELITCEPADVLPM TQRYFLF |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
ureC | NP_286680.1 | urease subunit alpha | Virulence | TAI | Protein | 0.0 | 70 |
ureC | NP_287088.1 | urease subunit alpha | Not tested | TAI | Protein | 0.0 | 70 |
ureC | YP_005684266.1 | Urease alpha subunit | Not tested | PiCp 7 | Protein | 6e-163 | 64 |
ureC | YP_005682174.1 | Urease alpha subunit | Not tested | PiCp 7 | Protein | 6e-163 | 64 |
ureC | YP_003784325.1 | urease subunit alpha | Not tested | PiCp 7 | Protein | 6e-163 | 64 |
ureC | YP_005686358.1 | Urease alpha subunit | Not tested | PiCp 7 | Protein | 6e-163 | 64 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
ureC | YP_001370984.1 | urease subunit alpha | VFG0270 | Protein | 7e-151 | 61 |