|
Name : Oant_2342 (Oant_2342) Accession : YP_001370885.1 Strain : Genome accession: NC_009667 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : - Position : 2463741 - 2465069 bp Length : 1329 bp Strand : - Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : TTGTGCGGCCTCGCTTCTGTTCAATTTCACGAAACGGCTTTTCCCATGCTCGACATCAAATGGATTCGCGAAAACCCTGA AACCCTCGACAAGGCGCTTGCCAAGCGTGGGGCTCAGTCGCTGTCGTCCGAATTGATGGCGCTGGACGAAAAACGCCGCG AATATGTCGGCAAGGTTCAGGCTGCGCAGGAGCGCCGCAATGCCGCTTCGAAGGAAATCGGCAAGGCCATGGCTGCGAAG GACGCAGCAACGGCTGACAAGCTGAAGGCCGAAGTCGCCGAGTTGAAGGATTTTCTTGCGCAGGCTGAGGACGAAGAGCG TCGCCTGACCAAGGAACTGAACGACGCTCTGTCGACCATTCCCAATATTCCGCTCGAAGACGTGCCACTTGGCAAGGACG AAAGCGACAATGTCGAAGTTCGTCGCGTCGGCAACCAGCGAAACTTTGCCTTTCAGCCGAAAGAACATTTCGAGTTGGGC GAGGCGCTCGGTTACATGGATTTTGAACGCGCTGCAAAGCTCGCAGGTTCGCGCTTTACCGTGTTGAAGGGGTCGCTTGC ACGCCTCGAACGTGCGCTTGGCCAGTTCATGCTCGACCTGCACACCATGGAACATGGCTATACCGAAACGATGCCGCCGC TGATGGTGCGCGATGAAGCTGTCTATGGCACCGGCCAGCTGCCGAAATTTTCGGAAGATCTGTTCCGCACGACGGATGGT CGCTGGCTGATTCCAACCGCCGAAGTTCCGCTGACCAATCTGGTTGCAGATGAAATCGTCGATACCAAGTCGCTCCCCCA GCGCTACACGGCGCTGACCCCATGCTTCCGTTCGGAAGCGGGTTCTGCCGGTCGCGACACACGCGGCATGCTGCGCCAGC ACCAGTTCCTGAAAGTGGAAATGGTGTCGATCACCGATGCCGACAGCTCGATCGCAGAGCATGAGCGCATGACCGCTTGT GCGGAAGAGGTGCTGAAGCGCCTTGGCCTGCCGTTCCGTACCGTCGTGCTCTGCACCGGCGACATGGGCTTCGGCGCACA GAAGACCTACGATATTGAAGTATGGCTGCCCGGCCAGAACACTTATCGCGAAATCTCGAGCTGCTCGGTCTGCGGTGATT TCCAGGGGCGTCGCATGAATGCCCGCTATCGTCCGGAAGGCGAGAAATCGACCCGTTTCGTGCATACGTTGAACGGTTCG GGTGTCGCCGTCGGACGCGCGCTGATTGCCGTCATGGAAAATTATCAGGAAGAAGATGGCAGCATTCATATTCCTGAAGC ATTGCAGCCATACATGGGCGGCCTCACGCGGATAGAGAAAACTGCGTGA Protein sequence : MCGLASVQFHETAFPMLDIKWIRENPETLDKALAKRGAQSLSSELMALDEKRREYVGKVQAAQERRNAASKEIGKAMAAK DAATADKLKAEVAELKDFLAQAEDEERRLTKELNDALSTIPNIPLEDVPLGKDESDNVEVRRVGNQRNFAFQPKEHFELG EALGYMDFERAAKLAGSRFTVLKGSLARLERALGQFMLDLHTMEHGYTETMPPLMVRDEAVYGTGQLPKFSEDLFRTTDG RWLIPTAEVPLTNLVADEIVDTKSLPQRYTALTPCFRSEAGSAGRDTRGMLRQHQFLKVEMVSITDADSSIAEHERMTAC AEEVLKRLGLPFRTVVLCTGDMGFGAQKTYDIEVWLPGQNTYREISSCSVCGDFQGRRMNARYRPEGEKSTRFVHTLNGS GVAVGRALIAVMENYQEEDGSIHIPEALQPYMGGLTRIEKTA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 3e-99 | 53 |
