Gene Information

Name : Oant_1931 (Oant_1931)
Accession : YP_001370476.1
Strain :
Genome accession: NC_009667
Putative virulence/resistance : Resistance
Product : major facilitator superfamily transporter
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG2814
EC number : -
Position : 2032658 - 2033845 bp
Length : 1188 bp
Strand : +
Note : PFAM: major facilitator superfamily MFS_1; KEGG: sec:SC004 tetracycline efflux protein

DNA sequence :
ATGAAACGCACATTGATGATTGTTCTCGCCGTTACTGCTTTGGACGCGGTGGGAATCGGGCTTGTGATGCCTGTCCTGCC
CAGTTTGCTGCGGGATGTGGCTCATTCCGACGATGTGGCGGGGCACTATGGCGTGTTGCTGTCTCTTTATGCACTGATGC
AGGTGTTCTTTGCCCCAATTCTGGGGGGAATGTCCGACCGGTTTGGCCGGAAGCCGATCCTGCTTGGCTCGCTCATTGGT
GCGATGATCGATTATGCCATCATGTCTGCCGCCCCTCATCTCTGGGTTCTTTATGCCGGGCGCATCCTATCGGGCATGAT
GGGGGCAACGATGGCGGTTGCAGGGGCTTGCATAGCGGATACGGTGGAAGAGGGCACACGTGCTCGAGCTTTTGGCTGGC
TGGGTGCATGTTATGGCGGCGGTATGATTCTTGGACCGGTCGTTGGCGGCGCGTTAGGAAGTATATCACTGACAGCTCCA
TTTGCCGCCGCCGCCGCGGTCAACGGTCTCATGGCCCTATCTGTCTACCTTGTGATGCCGGAGGTACGCCGAACAACCAA
ACCGGAGCCTCAGGCGAAGGGACTTCATTGCGCTCTTGTACCATCGGGTGTGCAGAAGGGGCTGAAACCGTTGCTGTGGG
TTTTCTTTCTCCTGCAATTGGTAGGGCAAATACCAGCTGCCTTGTGGGTGATATTCACTGAAGATCGTTTCCATTGGGAT
ACGACATATGTCGGCTTGTCGCTTGCGGCATTCGGTTTGCTGCATGCTATGTTTCAATGGCTTGGTACGGGGCGTCTCGT
CGCAACAATTGGAGCTGGATATACGATAATCATCGGAATAGCGGCTGACGGGCTGGGCATGGCATCTCTCGCGATCGCGA
CAGAAGGATGGATGACTGTGCCAATTCTCGTCTTGCTGGCATTTGGCGGGATAGCGATGCCAGCTCTGCAATCCGTCCTG
TCGGATAAGACCAGTCAAGACGAGCAAGGCGCGCTTCAGGGGATGTTGGCAAGTCTTACAAATATCAGTGCCGTCGCAGG
GCCGGTTATCTTTACAGCCTTTTATATGAGGACTGCAGCCAGCTGGAACGGATGGGTGTGGCTGTTTGGGCCCGCAATCT
ATCTGGCGGCCGCTCCATTACTCATTTTCGTTCGGCGTCAGTCGGCGGGCTTGCCGTCAAGGAGATGA

Protein sequence :
MKRTLMIVLAVTALDAVGIGLVMPVLPSLLRDVAHSDDVAGHYGVLLSLYALMQVFFAPILGGMSDRFGRKPILLGSLIG
AMIDYAIMSAAPHLWVLYAGRILSGMMGATMAVAGACIADTVEEGTRARAFGWLGACYGGGMILGPVVGGALGSISLTAP
FAAAAAVNGLMALSVYLVMPEVRRTTKPEPQAKGLHCALVPSGVQKGLKPLLWVFFLLQLVGQIPAALWVIFTEDRFHWD
TTYVGLSLAAFGLLHAMFQWLGTGRLVATIGAGYTIIIGIAADGLGMASLAIATEGWMTVPILVLLAFGGIAMPALQSVL
SDKTSQDEQGALQGMLASLTNISAVAGPVIFTAFYMRTAASWNGWVWLFGPAIYLAAAPLLIFVRRQSAGLPSRR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tetA CAJ77034.1 Tetracycline resistance protein Not tested AbaR1 Protein 3e-77 56
tet(G) AAK02051.1 tetracycline resistance protein Not tested SGI1 Protein 6e-74 56
tetA(G) ABZ01843.1 TetA(G) Not tested SGI2 Protein 6e-74 56
tetA(G) AGK06974.1 TetA(G) Not tested SGI1 Protein 6e-74 56
tetA(G) AGK07104.1 TetA(G) Not tested SGI1 Protein 6e-74 56
tetA YP_006098396.1 tetracycline resistance protein Not tested Tn2411 Protein 4e-74 54
tetA(A) ACK44537.1 TetA(A) Not tested SGI1 Protein 3e-74 54
tetA(A) AGK07027.1 TetA(A) Not tested SGI1 Protein 3e-74 54
tetA(A) AGK07085.1 TetA(A) Not tested SGI1 Protein 3e-74 54
tetA CAJ77066.1 Tetracycline resistance protein Not tested AbaR1 Protein 1e-74 54
tetA(A) ACN81011.1 TetA(A) Not tested AbaR5 Protein 2e-74 54
tetA YP_005797160.1 tetracycline resistance protein, class G (TETA(G)) Not tested AbaR4e Protein 2e-64 49
tetB AEA34667.1 tetracycline resistance determinant Not tested Not named Protein 5e-66 48
tetA(B) AEZ06045.1 tetracycline efflux protein Not tested Tn6167 Protein 6e-66 48
tetA(B) AAL08445.1 tetracycline resistance protein TetA(B) Not tested SRL Protein 5e-66 48
BJAB0868_00281 YP_008211607.1 Permeases of the major facilitator superfamily Not tested AbaR26 Protein 9e-66 48
tetA(B) AEQ20905.1 tetracycline resistance protein Not tested Tn6166 Protein 9e-66 48
BJAB07104_00277 YP_008207742.1 Permeases of the major facilitator superfamily Not tested AbaR25 Protein 9e-66 48
ABZJ_00260 YP_005524216.1 Tetracycline resistance protein, class B (TETA(B) ) (Metal-tetracycline/H(+) antiporter) Not tested AbaR22 Protein 8e-66 48
tetA(B) AFH57202.1 tetracycline resistance protein Not tested AbaR4a Protein 5e-66 48
tet(H) YP_005176248.1 tetracycline efflux protein, class H Not tested ICEPmu1 Protein 5e-53 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Oant_1931 YP_001370476.1 major facilitator superfamily transporter NC_010410.6002612.p0 Protein 2e-77 56
Oant_1931 YP_001370476.1 major facilitator superfamily transporter AF133140.gene.p01 Protein 2e-77 56
Oant_1931 YP_001370476.1 major facilitator superfamily transporter Y19114.gene.p01 Protein 1e-75 55
Oant_1931 YP_001370476.1 major facilitator superfamily transporter AF133139.gene.p01 Protein 8e-75 55
Oant_1931 YP_001370476.1 major facilitator superfamily transporter NC_011586.7045189.p0 Protein 1e-67 54
Oant_1931 YP_001370476.1 major facilitator superfamily transporter X75761.gene.p01 Protein 3e-73 54
Oant_1931 YP_001370476.1 major facilitator superfamily transporter NC_010410.6002597.p0 Protein 8e-75 54
Oant_1931 YP_001370476.1 major facilitator superfamily transporter AF534183.gene.p01 Protein 9e-75 54
Oant_1931 YP_001370476.1 major facilitator superfamily transporter CP001485.1.gene2821. Protein 8e-75 54
Oant_1931 YP_001370476.1 major facilitator superfamily transporter Y19116.gene.p01 Protein 2e-64 51
Oant_1931 YP_001370476.1 major facilitator superfamily transporter L06940.gene.p01 Protein 2e-65 51
Oant_1931 YP_001370476.1 major facilitator superfamily transporter AF070999.gene.p01 Protein 6e-66 50
Oant_1931 YP_001370476.1 major facilitator superfamily transporter V00611.gene.p01 Protein 1e-66 49
Oant_1931 YP_001370476.1 major facilitator superfamily transporter L06798.gene.p01 Protein 7e-57 48
Oant_1931 YP_001370476.1 major facilitator superfamily transporter AB084246.gene.p01 Protein 2e-66 48
Oant_1931 YP_001370476.1 major facilitator superfamily transporter NC_010558.1.6275971. Protein 3e-66 48
Oant_1931 YP_001370476.1 major facilitator superfamily transporter AY264780.2.gene3.p01 Protein 3e-58 47
Oant_1931 YP_001370476.1 major facilitator superfamily transporter AY743590.gene.p01 Protein 2e-55 46
Oant_1931 YP_001370476.1 major facilitator superfamily transporter AF038993.gene.p01 Protein 4e-58 45
Oant_1931 YP_001370476.1 major facilitator superfamily transporter CP004022.1.gene2534. Protein 6e-58 45
Oant_1931 YP_001370476.1 major facilitator superfamily transporter AF121000.gene.p01 Protein 5e-54 44
Oant_1931 YP_001370476.1 major facilitator superfamily transporter AJ250203.gene.p01 Protein 4e-56 44
Oant_1931 YP_001370476.1 major facilitator superfamily transporter Y15510.gene.p01 Protein 6e-54 43
Oant_1931 YP_001370476.1 major facilitator superfamily transporter AJ420072.gene.p01 Protein 5e-54 43
Oant_1931 YP_001370476.1 major facilitator superfamily transporter AF090987.gene.p01 Protein 1e-45 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Oant_1931 YP_001370476.1 major facilitator superfamily transporter VFG1036 Protein 3e-66 48