Gene Information

Name : Oant_1930 (Oant_1930)
Accession : YP_001370475.1
Strain :
Genome accession: NC_009667
Putative virulence/resistance : Virulence
Product : TetR family transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2031960 - 2032580 bp
Length : 621 bp
Strand : -
Note : PFAM: regulatory protein TetR; Tetracyclin repressor domain protein; KEGG: sec:SC005 RK2 tetracycline repressor protein

DNA sequence :
TTGGTGAGCGCATTGGCAAAACTGCACCGTGATGCCGTGATACAAACGGCACTGGAACTATTGAACGAGGTCGGAGAAGA
AGGCCTGACGACCCGTCGTCTGGCGGAACGGCTGGGTGTGCAACAACCTGCTCTCTACTGGCATTTCAAAAACAAACGTG
TGCTGCTGGATGCCCTTGCAGAAACGATTTTGGCAGAGCATCACGACCACGCCTTACCGCGCGCTGGGGAGAACTGGCGT
CATTTTCTAATTGAAAATGCACATAGTTTCCGACGGGCATTGCTGACTTATCGTGACGGTGCGCACATTCACGCCGGAAC
CCGCCCGAATAACAATCAGGCGGGACAGGCGGAAACCCAGATCGAGTTTTTGATTCAGGCAGGCTTTACACCCGCAAATG
CAGCGCGCGCGCTAATCGCCATAAGCCATTATGTTGTCGGTTCAGCGCTGGAACAACAGGCCGACATCCACGAAAGCGTG
CCGGGCGATGCCGTAAGCATCACTGCGACATCGGAAATTGCCCAAGCCATTGCAATACTGGATGCAGACGGCGCAGAAAA
TCTGTTCGATTTTGGCTTGATGCTATTAGTCGATGGACTGGAACGACATCGGCAGTCCTGA

Protein sequence :
MVSALAKLHRDAVIQTALELLNEVGEEGLTTRRLAERLGVQQPALYWHFKNKRVLLDALAETILAEHHDHALPRAGENWR
HFLIENAHSFRRALLTYRDGAHIHAGTRPNNNQAGQAETQIEFLIQAGFTPANAARALIAISHYVVGSALEQQADIHESV
PGDAVSITATSEIAQAIAILDADGAENLFDFGLMLLVDGLERHRQS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tetR ABZ01841.1 TetR Not tested SGI2 Protein 5e-46 59
tetR CAJ77033.1 Tetracycline repressor protein Not tested AbaR1 Protein 5e-46 59
tetR(G) AGK06973.1 TetR(G) Not tested SGI1 Protein 5e-46 59
tetR(G) AGK07103.1 TetR(G) Not tested SGI1 Protein 5e-46 59
tetR AAK02050.1 tetracycline resistance regulator protein Not tested SGI1 Protein 5e-46 59
tetR YP_006098395.1 tetracycline repressor Not tested Tn2411 Protein 8e-48 55
tetR(A) ACK44536.1 TetR(A) Not tested SGI1 Protein 6e-48 55
tetR(A) AGK07026.1 TetR(A) Not tested SGI1 Protein 6e-48 55
tetR(A) AGK07084.1 TetR(A) Not tested SGI1 Protein 6e-48 55
tetR(A) ACN81010.1 repressor protein Not tested AbaR5 Protein 1e-48 55
tetR CAJ77065.1 Tetracycline repressor protein Not tested AbaR1 Protein 7e-49 55
tetR1 YP_005176239.1 tetracycline repressor protein Not tested ICEPmu1 Protein 4e-42 51
tetR2 YP_005176247.1 tetracycline repressor protein Not tested ICEPmu1 Protein 4e-42 51
BJAB07104_00278 YP_008207743.1 Transcriptional regulator Not tested AbaR25 Protein 3e-37 50
BJAB0868_00282 YP_008211608.1 Transcriptional regulator Not tested AbaR26 Protein 3e-37 50
tetR AEA34668.1 tetracycline repressor protein Not tested Not named Protein 2e-37 50
ABZJ_00261 YP_005524217.1 tetracycline repressor protein TetR Not tested AbaR22 Protein 2e-37 50
tetR YP_005797161.1 tetracycline repressor protein class G Not tested AbaR4e Protein 2e-37 50
tetR AFH57203.1 repression protein Not tested AbaR4a Protein 2e-37 50
tetR(B) AEQ20906.1 tetracycline repressor protein Not tested Tn6166 Protein 2e-37 50
tetR AFV47970.1 repressor protein TetR Not tested AbaR25 Protein 2e-37 50
tetR(B) AEZ06046.1 repressor protein Not tested Tn6167 Protein 2e-37 50
tetR AFV47998.1 repressor protein TetR Not tested delta-AbaR25 Protein 2e-37 50
tetR AAL08444.1 tet repressor Not tested SRL Protein 5e-37 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Oant_1930 YP_001370475.1 TetR family transcriptional regulator VFG1035 Protein 2e-37 49