Gene Information

Name : Oant_1682 (Oant_1682)
Accession : YP_001370227.1
Strain :
Genome accession: NC_009667
Putative virulence/resistance : Resistance
Product : major facilitator superfamily transporter
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG2814
EC number : -
Position : 1766591 - 1767829 bp
Length : 1239 bp
Strand : +
Note : PFAM: major facilitator superfamily MFS_1; KEGG: sme:SMc01212 putative transport transmembrane protein

DNA sequence :
ATGCATGATCCCCAGTTTGTACGGCGGGGCTTGTTACTCGTCTTTATGACACTGTTCCTCGACATTATCGGCATTGCGAT
CATCATGCCGGTTCTGCCGACTTTTCTCGAAGAGCTGACCGGCGCGGATATCAGCACTGCAGCCGTCGATGGTGGCTGGC
TTTTGCTGGTCTATGCCGGAATGCAGTTCCTGTTCGCGCCGATGATCGGCAATCTGAGCGACCGTTTCGGGCGCCGGCCG
GTGCTGCTCGCCTCGATTTTCACCTTCGCACTCGACAATCTGATCTGTGCGCTCGCAACCACCTATTGGATGCTGTTTGT
CGGTCGTGTGCTGGCAGGCATCAGCGGAGCAAGCTTCGCGACGGCATCCGCCTACATTGCCGATGTCAGCGATGACAGCA
ATCGTGCGCGCAATTTCGGCCTGATCGGCATTGCTTTCGGTGTCGGCTTTGCGCTTGGTCCGGTGCTGGGCGGCTTGCTG
GGGGAGTTCGGTCCGCGCGTTCCGTTCTACGGAGCGGCGTTCCTGTCGTTCATCAACTTCATCCTCGCCTATTTCCTGTT
GCCGGAGACGTTGACGCGTGAAAACCGGCGCACCTTCCAGATCGCCCGCGCCAATCCGCTGGGCGCGCTCAAGCAGATGC
GAAGCTATCCCGGCATCGGCTGGGTGGTGCTGGTCTTCTTCCTGTTCTGGCTGGCCCATGCCGTCTATCCGTCCGTCTGG
GCCTTCGTCGGTGCTTATCGCTATAACTGGAGCGAAGCCCAGATAGGTCTGTCGCTGGGGCTTTTCGGTATCGGCGCGGC
GTTCGTGATGGCGCTGGTTCTGCCAAGGGTCTTGCCGGTGCTTGGCGAGCGGCGCACAGCGATCACAGGCGTGCTGTTTT
CCTGTCTTGGCATGATTGGATACGCCATCGCATGGGAAGGCTGGATGGTTTATGCCGTCATCTTCCTGACGGCGCTGGAA
GGTCTGGCCGATCCGCCGCTGCGCAGTATTGCGGCAGGCAAGGTTCCGCCTTCCGCGCAAGGCGAATTGCAGGGTGCACT
GACAAGCGTGTCGAGTATTACGACCATCATCGGCCCGCTCATCTTCACGCAGCTTTTCGCCGTGTTCACCGGCATGAATG
CGCCGTTCGTCTTCGCTGGAATGCCCTATGCTGTGGGAGCCGGACTGGTTTTTCTGGCACTGGTCATCGTGGTGGCGCGG
GTGCGTCCAACGCCCTTGGCCAAGCCCTCAGAGGTTTGA

Protein sequence :
MHDPQFVRRGLLLVFMTLFLDIIGIAIIMPVLPTFLEELTGADISTAAVDGGWLLLVYAGMQFLFAPMIGNLSDRFGRRP
VLLASIFTFALDNLICALATTYWMLFVGRVLAGISGASFATASAYIADVSDDSNRARNFGLIGIAFGVGFALGPVLGGLL
GEFGPRVPFYGAAFLSFINFILAYFLLPETLTRENRRTFQIARANPLGALKQMRSYPGIGWVVLVFFLFWLAHAVYPSVW
AFVGAYRYNWSEAQIGLSLGLFGIGAAFVMALVLPRVLPVLGERRTAITGVLFSCLGMIGYAIAWEGWMVYAVIFLTALE
GLADPPLRSIAAGKVPPSAQGELQGALTSVSSITTIIGPLIFTQLFAVFTGMNAPFVFAGMPYAVGAGLVFLALVIVVAR
VRPTPLAKPSEV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tetA(A) ACK44537.1 TetA(A) Not tested SGI1 Protein 5e-54 41
tetA(A) AGK07027.1 TetA(A) Not tested SGI1 Protein 5e-54 41
tetA(A) AGK07085.1 TetA(A) Not tested SGI1 Protein 5e-54 41
tetA YP_006098396.1 tetracycline resistance protein Not tested Tn2411 Protein 6e-54 41
tetA(A) ACN81011.1 TetA(A) Not tested AbaR5 Protein 5e-54 41
tetA CAJ77066.1 Tetracycline resistance protein Not tested AbaR1 Protein 3e-54 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Oant_1682 YP_001370227.1 major facilitator superfamily transporter NC_011586.7045189.p0 Protein 5e-50 41
Oant_1682 YP_001370227.1 major facilitator superfamily transporter X75761.gene.p01 Protein 6e-53 41
Oant_1682 YP_001370227.1 major facilitator superfamily transporter NC_009085.4918440.p0 Protein 3e-51 41
Oant_1682 YP_001370227.1 major facilitator superfamily transporter AF534183.gene.p01 Protein 2e-54 41
Oant_1682 YP_001370227.1 major facilitator superfamily transporter NC_010410.6002597.p0 Protein 2e-54 41
Oant_1682 YP_001370227.1 major facilitator superfamily transporter CP001485.1.gene2821. Protein 2e-54 41